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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_11618A |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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| Family |
NAC |
| Protein Properties |
Length: 349aa MW: 37401.6 Da PI: 7.1119 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_11618A | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 71.4 | 2.3e-22 | 18 | 149 | 5 | 128 |
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknr..atksg 81
f+ hP+d elv yL++ v++ ++i+ d+y + P L + ++ +e+ wyf ++ ++k+++gkrk r at +g
Oropetium_20150105_11618A 18 FHSHPSDLELVESYLRPWVDSGLQAG-SFIHVSDVYAAGPAALARdfapaDAQDGERAWYFLTPLRRKSERGKRKVRtvATGEG 100
6679***************9988655.88**************74466766777899********************766889* PP
NAM 82 yWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
W++ k+k+v+++ ++++vg ++t+ f +++ + +++ W+m e +l
Oropetium_20150105_11618A 101 WWHNEAKSKPVIDAldGRRHVGYRQTFSFMTKEGGQKTRAGWIMLELSL 149
************99988999**********999999999*****99776 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 349 aa
Download sequence Send
to blast |
MGRSPSPPAN DRPPRAPFHS HPSDLELVES YLRPWVDSGL QAGSFIHVSD VYAAGPAALA 60
RDFAPADAQD GERAWYFLTP LRRKSERGKR KVRTVATGEG WWHNEAKSKP VIDALDGRRH 120
VGYRQTFSFM TKEGGQKTRA GWIMLELSLD YDGEDLAESL VLCKVYRSPR HPGDPASPKT 180
PTGGKRVADV DEKSSASPQL KEKTGDDVGS SASLASAATV AAPRKAEGEI PDMAAAAAGR 240
NKEEATVDDD SAQTTAVAPR SKRKAADDAS SVAASAAEPP RSKRKTEGGS SRDPATEREL 300
HCPQCGCHLD LEALLAPANS KTEIKPETGI IHVQGDSLVK DHSLHQFL*
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