PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI01G10050.5
Organism
Oryza rufipogon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 268aa    MW: 27823.9 Da    PI: 11.3941
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI01G10050.5genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.83.6e-314199259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                      Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  ORUFI01G10050.5 41 ADGCQWRKYGQKMAKGNPCPRAYYRCTMAtGCPVRKQVQRCAEDRSILITTYEGTHNHP 99
                     7***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.3E-3425101IPR003657WRKY domain
SuperFamilySSF1182901.57E-2833101IPR003657WRKY domain
PROSITE profilePS5081129.50535101IPR003657WRKY domain
SMARTSM007744.1E-3740100IPR003657WRKY domain
PfamPF031061.1E-274299IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0016036Biological Processcellular response to phosphate starvation
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0080169Biological Processcellular response to boron-containing substance deprivation
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MAPQMGAAGA AGKSHDQQAQ DANMRKARVS VRARSEAPII ADGCQWRKYG QKMAKGNPCP  60
RAYYRCTMAT GCPVRKQVQR CAEDRSILIT TYEGTHNHPL PPAAMAMAST TSAAASMLLS  120
GSMPSADGAA GLMSSNFLAR TVLPCSSSMA TISASAPFPT VTLDLTHAPP GAPNAVPLNA  180
ARPGAPAPQF QVPLPGGGMA PAFAVPPQVL YNQSKFSGLQ MSSDSAEAAA AAAPAAVALA  240
GAAVARRRRR SPLTPTSRWR SRRRSRPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-2327103176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00209DAPTransfer from AT1G62300Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY6769280.0AY676928.1 Oryza sativa (indica cultivar-group) transcription factor OsWRKY99 (OsWRKY99) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015622142.11e-166probable WRKY transcription factor 31 isoform X2
SwissprotQ9XEC35e-89WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A0E0MTV50.0A0A0E0MTV5_ORYRU; Uncharacterized protein
STRINGOGLUM01G10620.11e-164(Oryza glumipatula)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-71WRKY family protein