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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORGLA01G0058200.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
bHLH |
Protein Properties |
Length: 439aa MW: 46091.5 Da PI: 7.591 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORGLA01G0058200.1 | genome | AGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 36.7 | 7.8e-12 | 255 | 300 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
h + Er+RR+++N++f L+ +lP+ K +K +iL +A eY+ksL+
ORGLA01G0058200.1 255 HMISERKRREKLNDSFVALKAVLPPG-----SKKDKTSILIRAREYVKSLE 300
8899********************95.....4999**************96 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 439 aa
Download sequence Send
to blast |
MEDCSSWIHG YANANATAGN NGFMCGYAAS CSPVEYQQQQ QLVGSQIEHH LNQISMQMGM 60 DDESAVYDGA SMVDDLLMAS SSAHHHAGAG SFQYSSPTSS SASFRSASVS CSPESSAAAT 120 THFLGPPAPS AAAAGFHYQE VSSQAPLPLP LPPYEPQHGQ YTTVLSPPPP APELPATTTP 180 ATGGAFRRYA RHLRPRRLPK PGRCGQRMFK TAMSVLTKMH VAATYNRQYY YQQAAAAAAS 240 ASAAEAPPSG NQLQHMISER KRREKLNDSF VALKAVLPPG SKKDKTSILI RAREYVKSLE 300 SKLSELEEKN RDLEARLASR PAAAAKNDKG ETAAAPAPEA GDETKRKDLV EIEVTTSGSG 360 PGAADAAAAA GGDQETCTLN VDLRGGGGGG GMSTTDVVLR TLQCLREQIG DGASLVAMST 420 SAGSGGRPPR ANLTLQLKV
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 258 | 263 | ERKRRE |
2 | 259 | 264 | RKRREK |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK102964 | 0.0 | AK102964.1 Oryza sativa Japonica Group cDNA clone:J033115I17, full insert sequence. |