 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OPUNC11G03220.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
NAC |
| Protein Properties |
Length: 287aa MW: 30814.3 Da PI: 6.6773 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC11G03220.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 132.4 | 3.1e-41 | 14 | 145 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
+pGfrF Pt+eel+ +yL+++++g++ ++e+vi+ +d+y ++P++L + + + ++++w+fF++r++++ +g r+ r+t sgyWkatg+
OPUNC11G03220.1 14 TPGFRFYPTEEELLGFYLRHRLAGTRPDVERVIPVIDVYGYHPSQLAAvageASARDTEQWFFFCPRAERELHGGRPARTTPSGYWKATGSPSC 107
69***************************99***************84455333335569*******************************999 PP
NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
v+s+ +++++g+k+t+vfy+grap+g+kt+W m+ey++
OPUNC11G03220.1 108 VISSaTNRVIGVKRTMVFYQGRAPTGTKTRWKMNEYKA 145
998868889***************************85 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 287 aa
Download sequence Send
to blast |
MATTRSSGSD PFATPGFRFY PTEEELLGFY LRHRLAGTRP DVERVIPVID VYGYHPSQLA 60
AVAGEASARD TEQWFFFCPR AERELHGGRP ARTTPSGYWK ATGSPSCVIS SATNRVIGVK 120
RTMVFYQGRA PTGTKTRWKM NEYKAVADDD ADAGAAMLHP IAPPRLRNEL GVCRVYISTG 180
TLRSFDRRPL DNQAAHTQQQ LPSLTAAVAA VNTNLAAAGV VFAGAQGDSS RDGSSSSGSR 240
ELTGGGYGSE EDAIDWNSLI SSATVDDLGF STVVGFDPSI VGSWPQV
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 5e-29 | 15 | 176 | 19 | 163 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 5e-29 | 15 | 176 | 19 | 163 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 5e-29 | 15 | 176 | 19 | 163 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 5e-29 | 15 | 176 | 19 | 163 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 5e-29 | 15 | 176 | 22 | 166 | NAC domain-containing protein 19 |
| 3swm_B | 5e-29 | 15 | 176 | 22 | 166 | NAC domain-containing protein 19 |
| 3swm_C | 5e-29 | 15 | 176 | 22 | 166 | NAC domain-containing protein 19 |
| 3swm_D | 5e-29 | 15 | 176 | 22 | 166 | NAC domain-containing protein 19 |
| 3swp_A | 5e-29 | 15 | 176 | 22 | 166 | NAC domain-containing protein 19 |
| 3swp_B | 5e-29 | 15 | 176 | 22 | 166 | NAC domain-containing protein 19 |
| 3swp_C | 5e-29 | 15 | 176 | 22 | 166 | NAC domain-containing protein 19 |
| 3swp_D | 5e-29 | 15 | 176 | 22 | 166 | NAC domain-containing protein 19 |
| 4dul_A | 5e-29 | 15 | 176 | 19 | 163 | NAC domain-containing protein 19 |
| 4dul_B | 5e-29 | 15 | 176 | 19 | 163 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK109939 | 0.0 | AK109939.1 Oryza sativa Japonica Group cDNA clone:002-154-A12, full insert sequence. |
