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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC05G16280.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 346aa MW: 37302.9 Da PI: 6.5579 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC05G16280.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 53.6 | 5.7e-17 | 180 | 227 | 5 | 55 |
AP2 5 GVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
GVr ++ +g+++AeIrd + ng +r++lg+f t+e+Aa a+++a+++ +g
OPUNC05G16280.1 180 GVRKRP-WGKYAAEIRDSTRNG--ARVWLGTFNTPEQAALAYDQAALSVRG 227
9*****.**********44465..***********************9988 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 346 aa
Download sequence Send
to blast |
MEPNYSDYHP NGVPIDAYYE HGYGHDGHLD DHGHGHHLIP SCYSTTTTSH PEPSYSYCNW 60 SFLHADATAT SSSESSASGS SGAAHIVANT ITTGASTAFV RQLHFGGEYY DDETADISAL 120 MEAASISCWT NGGGASTSQT GSMEGVEELV RRAAAASAPD GANDMNGSSD KEAAARPLIG 180 VRKRPWGKYA AEIRDSTRNG ARVWLGTFNT PEQAALAYDQ AALSVRGPGA VLNYPLHRVR 240 ESLRTLELAA AASESPVLAL KRRHRIRKRS TTKKTPAGKE ADETPATTSE GKKKRQVNTT 300 SHRHGKQNQT SSPCVLELED LGTDYLEELL ALSEEQRTPH RPLPIT
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC130602 | 0.0 | AC130602.5 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone B1122D01, complete sequence. |
GenBank | AP014961 | 0.0 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |