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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC03G05860.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 312aa MW: 34952 Da PI: 6.5504 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC03G05860.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.3 | 1.9e-18 | 121 | 171 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++y+GVr+++ +gr++AeIrdp++ +r++lg++g+aeeAa a+++ +++++g
OPUNC03G05860.1 121 KKYRGVRRRP-SGRFAAEIRDPKK---GRRVWLGTYGSAEEAAMAYDREARRIRG 171
59********.7*********954...4************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 312 aa
Download sequence Send
to blast |
MCGGAILAEL TPARVHRRLT VSEILPETTT PPAERRTTTT RPKRKAASAS RSYDVDFEAE 60 FELFEDDDDD EEAEFEISED DEDGDETLAV SFSSDVSSSS RPLRRVAAAA GRRKASKEEK 120 KKYRGVRRRP SGRFAAEIRD PKKGRRVWLG TYGSAEEAAM AYDREARRIR GKCARLNFPG 180 DLDGSPRRRN LPCWTIDLNL PAPAAVSDDD DAMAVDAGRA GQRGSEPAES KIKELIKQGP 240 HNDAKFKLTE DTSSSKTRVS MALQLQYYAA LVAECDREME EIAAVERDLE RRRRQVLEHR 300 GHLVRQASLL LN
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 112 | 129 | RKASKEEKKKYRGVRRRP |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC229740 | 1e-149 | AC229740.1 Oryza minuta clone OM__Ba0228D20, complete sequence. |
GenBank | AC229761 | 1e-149 | AC229761.1 Oryza minuta clone OM__Ba0159K04, complete sequence. |