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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC02G30250.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 336aa MW: 36123.2 Da PI: 7.7472 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC02G30250.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.7 | 3.9e-20 | 165 | 214 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++a+ +l+g
OPUNC02G30250.1 165 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEDAALAYDKAAFRLRG 214
59******9.**********965...5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 336 aa
Download sequence Send
to blast |
MAAAIDMYKY NTSTHQIASS DQELMKALEP FIRSASSSSA SSPYHHYYSS SPSMSQDSYM 60 PTPSYPTSSI TTAAATTSSF SQLPPLYSSQ YHASPAASAT NTMGLTHLGP AQIQQIQAQF 120 LAQQQQQRGL AGAFLGPRGQ PMKQSGSPPR AGPFAAVAGA AQSKLYRGVR QRHWGKWVAE 180 IRLPKNRTRL WLGTFDTAED AALAYDKAAF RLRGDLARLN FPTLRRGGAH LAGPLHASVD 240 AKLTAICQSL ATTSSSKNTP AESAASAAEP ESPKCSASTE GEDSVSAGSP PPPTPLSPPV 300 PEMEKLDFTE APWDESETFH LRKYPSWEID WDSILS
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK105877 | 0.0 | AK105877.1 Oryza sativa Japonica Group cDNA clone:001-204-C05, full insert sequence. |
GenBank | AK105991 | 0.0 | AK105991.1 Oryza sativa Japonica Group cDNA clone:001-205-H01, full insert sequence. |
GenBank | AP004119 | 0.0 | AP004119.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1288_G09. |
GenBank | AP014958 | 0.0 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |
GenBank | CP012610 | 0.0 | CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence. |