 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC02G10120.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 395aa MW: 42159.1 Da PI: 5.5045 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC02G10120.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 28.2 | 3.7e-09 | 178 | 197 | 2 | 21 |
--SS-EEEEEEE--TT-SS- CS
WRKY 2 dDgynWrKYGqKevkgsefp 21
D ++WrKYGqK++kgs++p
OPUNC02G10120.1 178 ADVWAWRKYGQKPIKGSPYP 197
69****************99 PP
|
| 2 | WRKY | 51.5 | 2e-16 | 227 | 266 | 21 | 59 |
-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 21 prsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
r+YYrC+s+ gCp++k+vers++dp++++ tY+g+Hnh+
OPUNC02G10120.1 227 NRGYYRCSSSkGCPARKQVERSRSDPNTFILTYTGDHNHS 266
59******998****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0007263 | Biological Process | nitric oxide mediated signal transduction |
| GO:0009739 | Biological Process | response to gibberellin |
| GO:0042742 | Biological Process | defense response to bacterium |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 395 aa
Download sequence Send
to blast |
MEEELCGNNW DLDAVVRLGC CRRRISPASA VAAQQVDPFA PFLLPVTQPT TVATEVAEKE 60
VGVEAGWSFP ELAVRDGGGL GRDADELLKA FCAAFPSSSS SSSLPAPAPP PPQPQPEQPQ 120
QKPVAVVQEN LPVPTTAAPA KAQPAAVRQV PGGVPRSKRR KNQQKKVVRH VPADGVSADV 180
WAWRKYGQKP IKGSPYPSPV SISPAGHRRR RRREMEEKLT GALLCWNRGY YRCSSSKGCP 240
ARKQVERSRS DPNTFILTYT GDHNHSAPTH RNSLAGTTRN KLPSSTSASA QPQPPPPSVV 300
VAGGAEAASH QGTTSPAGLS PTTPLRTPSM EEEEEDDDEL LVEDMEMAGE DELLFLNGGG 360
DDATAALDGT PMSSLFDIDE PFLPSPWTEP TAAGS
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP004683 | 1e-129 | AP004683.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, PAC clone:P0006C08. |
| GenBank | AP014958 | 1e-129 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |
