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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ONIVA07G11150.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
MYB |
Protein Properties |
Length: 202aa MW: 23189.6 Da PI: 10.2702 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ONIVA07G11150.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 46.3 | 9.8e-15 | 29 | 73 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+WT+eEd +l ++ k+ ++W+++ar m+ +R++ +c++rw+ +l
ONIVA07G11150.1 29 AWTPEEDARLQRLAKENSFRRWSRVARSMP-RRSARSCRDRWRHHL 73
7*****************************.***********9886 PP
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2 | Myb_DNA-binding | 24.4 | 6.9e-08 | 81 | 124 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
++T+ +d+ l++++ +lG + Wk I r + gRt k+rw+ ++
ONIVA07G11150.1 81 PFTARDDDELLRLHYRLGDR-WKEIGRAVY-GRTSRVMKHRWRELR 124
79****************99.********9.***********9875 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 202 aa
Download sequence Send
to blast |
MDQEVIMATP PLPPPPRARC VVRLKLPPAW TPEEDARLQR LAKENSFRRW SRVARSMPRR 60 SARSCRDRWR HHLARDVYHR PFTARDDDEL LRLHYRLGDR WKEIGRAVYG RTSRVMKHRW 120 RELRRSGFPL AAAARKEQAL AMVDNMVESE VDESDQSLPP PELQRSLADA LASSFGCCSL 180 AHDHAMDPLA GSLALGFACM AV
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP005200 | 0.0 | AP005200.4 Oryza sativa Japonica Group genomic DNA, chromosome 7, PAC clone:P0673E01. |
GenBank | AP014963 | 0.0 | AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence. |