PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G28540.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 377aa MW: 40693.2 Da PI: 9.7554 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 66.5 | 4.6e-21 | 240 | 302 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +ke+krerrkq+NRe+ArrsR+RK+ae+eeL++kv+ L+aeN++L+ e+++l++ ++kl+ e+ ONIVA01G28540.3 240 DKESKRERRKQSNRESARRSRLRKQAETEELARKVELLTAENTSLRREISRLTESSKKLRLEN 302 689********************************************************9887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 2.3E-19 | 1 | 66 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Gene3D | G3DSA:1.20.5.170 | 4.6E-17 | 237 | 299 | No hit | No description |
SMART | SM00338 | 1.7E-20 | 240 | 304 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.2E-19 | 241 | 302 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 13.599 | 242 | 305 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.13E-10 | 244 | 298 | No hit | No description |
CDD | cd14702 | 8.27E-22 | 245 | 293 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 247 | 262 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 377 aa Download sequence Send to blast |
MGNDEAVVTQ KMGKAPSPPK DHPALSPYLD WSNMQAYYGP GILPPTFFSP GIAAGHTPPP 60 FIWGPQVSFL SLRVLSYFPV PLQPLVPSAF GKPYAAIYPP GGAFSHPFMP LMVSPLSMEP 120 AKSVNSKDNC SNKKMKEIDG AAMSTGSGNS EKTSGDCSLE GFSDGNNQKA SGTPKKRSID 180 DRPKSGVETG GALTPNDRPS EQAALPNLCI PVTAIKPDVS TASDFRVIAT PVTEVPTKDD 240 KESKRERRKQ SNRESARRSR LRKQAETEEL ARKVELLTAE NTSLRREISR LTESSKKLRL 300 ENSALMEKLT ETGPDEAQEV PPVKTKAQQA RGVENFLSMI DKTGTPRSSG HMDHAIATPK 360 LRQLLGSGLA TDAVAAR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 256 | 262 | RRSRLRK |
2 | 256 | 263 | RRSRLRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AY606941 | 0.0 | AY606941.1 Oryza sativa (indica cultivar-group) salt-stress inducible bZIP protein mRNA, complete cds. | |||
GenBank | CT833838 | 0.0 | CT833838.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI236J06, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015650461.1 | 0.0 | common plant regulatory factor 1 isoform X1 | ||||
Refseq | XP_015650471.1 | 0.0 | common plant regulatory factor 1 isoform X1 | ||||
TrEMBL | A0A0E0FQH6 | 0.0 | A0A0E0FQH6_ORYNI; Uncharacterized protein | ||||
STRING | ONIVA01G28540.3 | 0.0 | (Oryza nivara) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2776 | 38 | 88 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46270.1 | 3e-47 | G-box binding factor 3 |