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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OMERI09G03030.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 262aa MW: 28333.2 Da PI: 4.4495 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OMERI09G03030.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.3 | 1.1e-19 | 101 | 149 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +grW++eIrdp+ + +r++lg+f+ta eAa+a++a +++++g
OMERI09G03030.1 101 YRGVRQRP-WGRWASEIRDPV----KgARVWLGTFDTAVEAARAYDAEARRIHG 149
9*******.**********75....44*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 262 aa
Download sequence Send
to blast |
MCGGALIPND YDKPPPPPPS ESSEWDATTK MTKKKKRGGG GDDDWEAAFR EFIAGDIDDD 60 DGGVSMFPSG AGTMETTTEV AAAAVVERPR RWRRVRRSYP YRGVRQRPWG RWASEIRDPV 120 KGARVWLGTF DTAVEAARAY DAEARRIHGQ KARTNFPPDE PPPAPPSQAP FCFLLDDDDD 180 GVARGNSTAS SAPDSVSASA TSTVSGERGD ELILLECCSD DVMDSLLAGF DVSSEPRSVL 240 VWSPNPSCPT PGSAPDRENW NG
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU429443 | 0.0 | EU429443.1 Oryza nivara strain IRRI-IRGC-101524 submergence-1B mRNA, complete cds. |