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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM04G20610.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 328aa MW: 34838.6 Da PI: 5.5848 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM04G20610.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63 | 6.6e-20 | 138 | 189 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+y+GVr+++ +g+++AeIrdp+ +g r++lg+++t+ eAa+a+++a+ +++g+
OGLUM04G20610.1 138 KYRGVRQRP-WGKFAAEIRDPKRRG--SRVWLGTYDTPVEAARAYDRAAFRMRGA 189
8********.**********96554..**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MDFHHGDADD FALEFIREHL LGVDGATATA TEPADLEVVE PAAAYPPMSW QEQRQQEQHG 60 CHVELTHEHL ESAPAAEAAA AFRTAPAQPA AEVMIKFGGE PSPVRPSSSL TISLPPSSFG 120 SWASAAAPAA AAVEDFRKYR GVRQRPWGKF AAEIRDPKRR GSRVWLGTYD TPVEAARAYD 180 RAAFRMRGAK AILNFPNEVG TRGAELWAPP PPPPAHSAAA STTNKRKRQP SEDPDDGVEV 240 IGVVSKAVKT EAPTSNSSSL SSSLTSRDTT PATSSAGAEH AGAAAESSPA TPSSWSWEQY 300 WEALLGGLPP LSPLSPHPAL GFPQLTVN
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK109141 | 0.0 | AK109141.1 Oryza sativa Japonica Group cDNA clone:002-155-E09, full insert sequence. |
GenBank | AL607006 | 0.0 | AL607006.4 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence. |
GenBank | AL731613 | 0.0 | AL731613.5 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065H10, complete sequence. |
GenBank | AP014960 | 0.0 | AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence. |
GenBank | AY339379 | 0.0 | AY339379.1 Oryza sativa (japonica cultivar-group) Ap26 mRNA, complete cds. |