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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM03G06090.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 321aa MW: 33718.2 Da PI: 4.691 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM03G06090.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.3 | 1.9e-18 | 91 | 141 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s+y GVr+++ +g+W+AeIrdp+e r++lg+f tae Aa a++aa++ l+g
OGLUM03G06090.1 91 SKYWGVRRRP-WGKWAAEIRDPVE---GVRVWLGTFATAEAAAHAYDAAARDLRG 141
79********.**********866...3************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 321 aa
Download sequence Send
to blast |
MCGGAILANI IPATPPRRAT AAHVWPGGDG EKRRKVGGGG CDDDFEAAFE RFGREDSEME 60 EEEVEEVVVG KKAAVRRRRA APAAGRRARP SKYWGVRRRP WGKWAAEIRD PVEGVRVWLG 120 TFATAEAAAH AYDAAARDLR GATAKLNFPS SSSSTAATPR PRKCRPTTAT ATPKATTPNV 180 VVVVNLVDEE AEASESSGAS SSALPDFSWQ GMSASSDDDA AAQQALLDAA GGAKKRPRSE 240 PHVTSDDEVL PASFDSDNNT AAAGLLPLDD PFLFGDQFGD LNGGAFASLM DGLFAAGEAN 300 VAGESVGLWS FGDDGLNASY Y
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC079633 | 0.0 | AC079633.9 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G08, from Chromosome 3, complete sequence. |
GenBank | AP014959 | 0.0 | AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. |