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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART09G04870.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 317aa MW: 35552.1 Da PI: 5.1888 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART09G04870.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 49.9 | 7.6e-16 | 70 | 119 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54
s+y+GVr++ +g+W+AeIrd + r r ++g+f ++eeAa+a+ a ++++
OBART09G04870.1 70 SKYRGVRRRA-WGKWAAEIRDpV-----RkSRKWIGTFNSEEEAAAAYLAQSNQFH 119
89*****777.**********44.....55******************88766665 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 317 aa
Download sequence Send
to blast |
MVPSSRKVRV FCSDPDATDS SDEDDQNKKE RRFSREILIP MESSKASKPV KTLVQCGTKT 60 VKDSEKEPTS KYRGVRRRAW GKWAAEIRDP VRKSRKWIGT FNSEEEAAAA YLAQSNQFHE 120 ELMALKIQSS VSEQEDLSSS VTISCVSSSQ SCDQKIQAKP QEHKRVSVVV NRETVEQKFK 180 AQPQAQKIKA QPEVQKRVSV KISHETEDEH LLNLPSMPKG KEISMGAVLG RIDEIPVSNC 240 VGHIDEFPPD DFTRLADAFP VSDFIGMADV PLGDDYIGLA DISHLPLPIT DLKFDLDAEL 300 NWDGFNFASL EQELNCL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CT831165 | 0.0 | CT831165.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI221K24, full insert sequence. |