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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART07G22260.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 342aa MW: 37191.7 Da PI: 4.5305 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART07G22260.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.2 | 2.3e-19 | 110 | 160 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++y+G+r+++ +g+W+AeIrdp++ r++lg+fgtaeeAa a++ +++++g
OBART07G22260.1 110 TRYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFGTAEEAAMAYDVEARRIRG 160
68********.**********954...4************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 342 aa
Download sequence Send
to blast |
MCGGSILGDL HLPVRRTVNA GDLWGDAGKG RDGGDGLKKR KGSSWDFDVD CDDDDDDDFE 60 ADFEEFEDDY GDDDDVGFGH DDQESDMNGL KLAGFSTTKL GLGGSRKRKT RYRGIRQRPW 120 GKWAAEIRDP RKGVRVWLGT FGTAEEAAMA YDVEARRIRG KKAKVNFPDA AAAAPKRPRR 180 SSAKHSPQQQ KARSSSSSPA SLNASEAVFK SNNNRVSSAG SSTDATAAAI AIDDGVKLEL 240 LSETDPSPPM AAAAAAWLDA FELNDLDGSR CKDNAFDHQI HKVEAAVADE FAFYDDPSYM 300 QLGYQLDQGN SYGNIDALFG GEAVNIGGLW SFDDMPMEFR AY
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK061047 | 0.0 | AK061047.1 Oryza sativa Japonica Group cDNA clone:006-205-F01, full insert sequence. |
GenBank | AK067060 | 0.0 | AK067060.1 Oryza sativa Japonica Group cDNA clone:J013090P08, full insert sequence. |
GenBank | AK109360 | 0.0 | AK109360.2 Oryza sativa Japonica Group cDNA clone:006-206-B03, full insert sequence. |