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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART06G03990.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 348aa MW: 37323.4 Da PI: 4.5226 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART06G03990.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.1 | 2.1e-18 | 121 | 171 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
+++GVr ++ +g++ AeIr+ +++r++lg+f+taeeAa+ +++a+++l+g+
OBART06G03990.1 121 KFRGVRKRP-WGKYGAEIRV----SqQSARVWLGTFDTAEEAARVYDHAALRLRGP 171
89*******.**********....3245**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 348 aa
Download sequence Send
to blast |
MIEAIVEKKA RRIVRGRWHV EASNEAAAAA PAVVAAPAPR VVRVLYRDHD ATDSSGDDDG 60 EDDAPRRARL LVHEIHVARQ PVAMSPAAAA SSSQRRRVGP MKRRTEAAVD AMAAEVAPER 120 KFRGVRKRPW GKYGAEIRVS QQSARVWLGT FDTAEEAARV YDHAALRLRG PAATTNFPVT 180 PTAPAPSPPP SRDTNAGAAS GYDESSDESQ LVGSPVSVLR PMPARATAKK EAKEEDDSAP 240 DILGISAGDG LIFPFTGDVM NFPPPDEDMF GGGISFGEPT PPPMVFDDDC MARLGHVPND 300 DVDDEHPVTS SYFLDDDLGD LPSWTEVDGF FSDVGGDDLF AAEPFPAL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012614 | 0.0 | CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence. |