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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART04G20640.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 318aa MW: 33791.6 Da PI: 4.8782 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART04G20640.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63 | 6.3e-20 | 139 | 190 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+y+GVr+++ +g+++AeIrdp+ +g r++lg+++t+ eAa+a+++a+ +++g+
OBART04G20640.1 139 KYRGVRQRP-WGKFAAEIRDPKRRG--SRVWLGTYDTPVEAARAYDRAAFRMRGA 190
8********.**********96554..**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009409 | Biological Process | response to cold |
GO:0010200 | Biological Process | response to chitin |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 318 aa
Download sequence Send
to blast |
MDFPGDAEDF ALEFIREHLL GGDAPVLPPA AVPAAAAYPP TSSMFLPQQQ RGYAGLTPQE 60 YVVDSAPAAD QAAFRDDQPD PAADVMIMFG GERFPAVKPS SSSSPSLTVT VPPSSFGSWA 120 PAAVPAAAAT AAAVEDFRKY RGVRQRPWGK FAAEIRDPKR RGSRVWLGTY DTPVEAARAY 180 DRAAFRMRGA KAILNFPNEV GTRGAELWAT PPPTNKRKRQ PEDDTAAADD VEVIGVANKA 240 VKTEAPTSAY SSSSLSSMSR DTTATTSSTG TSTGSSEPTS FPVVTPSSWS WDQYWDGLPP 300 LSPLSPHPAL GFPQLTVS
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012612 | 0.0 | CP012612.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 4 sequence. |