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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART03G06100.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 283aa MW: 30334.5 Da PI: 4.536 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART03G06100.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 55.5 | 1.4e-17 | 52 | 101 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp+ + r++lg+f ae Aa a++ a+++++g
OBART03G06100.1 52 QYRGVRRRP-WGKWAAEIRDPV----KgIRVWLGTFTNAEAAALAYDDAARAIRG 101
69*******.**********75....44***********************9997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 283 aa
Download sequence Send
to blast |
MAMDRDANCA VQRTTELELD RKAARLEGIP RKARKAAAAA AAASSRRRKP AQYRGVRRRP 60 WGKWAAEIRD PVKGIRVWLG TFTNAEAAAL AYDDAARAIR GDRAKLNFPS ATTPDTRKRG 120 RATAAAAPAV KATPVINLVE EEEVAAAMAS IKYEPETSEN SESNALPDFS WQGMSASDEF 180 AVAAAALDSD DDLAKKRPRT EPEDTTTTTD SGSGDDTDAL FDTLLFADQY NYFNGGAYES 240 LDSLFSADAV QTTAAAAAAD QGMGLWSFDD GCCLVDVEAS LSF
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 46 | 58 | RRKPAQYRGVRRR |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012611 | 0.0 | CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence. |