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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART02G26470.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 344aa MW: 36345.6 Da PI: 5.7498 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART02G26470.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64.3 | 2.5e-20 | 154 | 205 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+y+GVr+++ +g+++AeIrdp+++g r++lg+++ta eAa+a+++a+ +++g+
OBART02G26470.1 154 KYRGVRQRP-WGKFAAEIRDPKKRG--SRVWLGTYDTAIEAARAYDRAAFRMRGA 205
8********.***********8876..**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009409 | Biological Process | response to cold |
GO:0010200 | Biological Process | response to chitin |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 344 aa
Download sequence Send
to blast |
MDFSGDIDDL ISLQLLHDQL LGVEADACLP VAVHHDGVAA YTEHQQGFHP AAFLPQQPMT 60 MTPAGYVDMA NDQYLGAHAA AGEAEAVYRA AAAEPVMIRF GGEVSPVSDP RRPPLTISLP 120 PTSHAWAAAE AVHPAALLQA QAAAAAADPN DFRKYRGVRQ RPWGKFAAEI RDPKKRGSRV 180 WLGTYDTAIE AARAYDRAAF RMRGAKAILN FPNEVGSRGA DFLAPPPPPP PPTTSTHGKR 240 KRHETAAADP DVEVIGESSK SVKTETYTSP ASSSLASTTT STVTSSSTSP SPSSEAAACG 300 GGGGELFVPP MPSSWSWDQL EGFFGILSPL SPHPQMGFPE VAVN
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP004676 | 0.0 | AP004676.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1003_B06. |
GenBank | AP005006 | 0.0 | AP005006.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, PAC clone:P0519E06. |
GenBank | AP014958 | 0.0 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |