|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
OBART02G22620.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
ERF |
Protein Properties |
Length: 345aa MW: 35974.6 Da PI: 7.5896 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART02G22620.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 54.6 | 2.7e-17 | 57 | 107 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++y+GVr+++ +gr++AeIrdp + r +lg+f+tae+Aa a++ a+++++g
OBART02G22620.1 57 TRYRGVRRRP-WGRFAAEIRDPA----SkERRWLGTFDTAEQAACAYDVAARAMRG 107
68********.**********83....25999**********************98 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009733 | Biological Process | response to auxin |
GO:0009880 | Biological Process | embryonic pattern specification |
GO:0010084 | Biological Process | specification of organ axis polarity |
GO:0048825 | Biological Process | cotyledon development |
GO:0051726 | Biological Process | regulation of cell cycle |
GO:0005634 | Cellular Component | nucleus |
GO:0005829 | Cellular Component | cytosol |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 345 aa
Download sequence Send
to blast |
MQAQHAMDEP ANAQLYGHAH AHSHHHRSKR PSPGGGGGGA ASLGADGGGG GGSLSGTRYR 60 GVRRRPWGRF AAEIRDPASK ERRWLGTFDT AEQAACAYDV AARAMRGTRA RTNFPVPAAA 120 GFPGGGGGGC WPWVNIPPQG AAAAASHQQP LNTFLLHNLL MSSSPHGCLL LHHAGHGHGH 180 AHSHSHSHSR AHNPSTRPPT SAPPPPPPAA ASSATTAPAT TTGAAATSAP GADDDAWGFL 240 LRREPPEAGL LQDVLHGFYP TRRPHDDAGP APKLERPYEA TSSYRVSSPW GAVEDCDDGD 300 GDGDDDYRGF PMMPQGLLED VIQCPPYMEV LAAPSAAVGR VSRRG
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP004023 | 0.0 | AP004023.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1126_D09. |
GenBank | AP004079 | 0.0 | AP004079.2 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1067_B01. |
GenBank | AP014958 | 0.0 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |
GenBank | CP012610 | 0.0 | CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence. |