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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART01G25240.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 299aa MW: 31587.8 Da PI: 4.2452 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART01G25240.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.6 | 4.1e-20 | 101 | 151 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++++GVr+++ +g+++AeIrd + r r++lg+f+taeeAa+ +++a+ +l+g
OBART01G25240.1 101 TKFRGVRRRP-WGKFAAEIRDpW-----RgVRVWLGTFDTAEEAARVYDNAAIQLRG 151
69********.**********88.....55*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0042991 | Biological Process | transcription factor import into nucleus |
GO:0048366 | Biological Process | leaf development |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 299 aa
Download sequence Send
to blast |
MSRSRTVRIF WDDPDLTDSS GEDEGCGGRR VGSMVRELPP AQLPVPQAGF APAAAAAAAA 60 LPEQCSGGDG DMGRRVVGGG FTVGVGRRRL TKGGGPGAPS TKFRGVRRRP WGKFAAEIRD 120 PWRGVRVWLG TFDTAEEAAR VYDNAAIQLR GPSATTNFSA STNSAGAQDP VAVGYESGAE 180 SSPAVSSPTS VLRKVPSLCS LAEDKDDYEV GPCEPATAAG SNLTVLEEEE LGEFVPFEDA 240 PVYGGSNFWD FEPESGFLYA EPSSPETPWD AGATSSGEAQ DYFQDLRDLF PLNPLPAIF
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP003294 | 0.0 | AP003294.2 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0694A04. |
GenBank | AP014957 | 0.0 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |