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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART01G02050.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 338aa MW: 36528.6 Da PI: 4.5185 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART01G02050.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 41.6 | 3e-13 | 114 | 157 | 1 | 49 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaa 49
++y+GVr +k +g+W+AeIr + + r +lg+f+ta+ A +a+ +
OBART01G02050.1 114 TCYRGVRLRK-WGKWAAEIRNpF-----TgHREWLGTFDTADAASAAY-QS 157
68******99.**********55.....45999*******55555555.43 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 338 aa
Download sequence Send
to blast |
MAPSKQQQML LKKVMAKKPK TKRLSGFGLK PSAAFSRPHV PSAAASLQPS RRVRVVFEDP 60 DATDSDSDDD EDAGAASKKR YFELFIGKPA SSTKQASPAS TVAAYANIGK VGSTCYRGVR 120 LRKWGKWAAE IRNPFTGHRE WLGTFDTADA ASAAYQSASR NFAEEKRRRG VASSASPASS 180 ATPTPTASSS SSTSAAPFAH PSPSSVLEAT KPAPKPESPP LPEQAATPLL VEATNETAEL 240 PDDPEFYKDI LRGLQLPDID PMDFRAGLDA LDISDVPAYM NGEQDVLFTE DMLLGDFAEE 300 DDLDLDDIGD DFCEDFPEIP SGYDFGRGDM FRQVDFCV
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK119645 | 0.0 | AK119645.1 Oryza sativa Japonica Group cDNA clone:002-130-G05, full insert sequence. |
GenBank | AP002526 | 0.0 | AP002526.1 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0504H10. |
GenBank | AP014957 | 0.0 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |
GenBank | AY341828 | 0.0 | AY341828.1 Oryza sativa (japonica cultivar-group) AP2 domain-containing protein AP210 mRNA, complete cds. |
GenBank | EU837259 | 0.0 | EU837259.1 Oryza sativa Japonica Group clone KCS234C10 AP2 domain containing protein mRNA, complete cds. |
GenBank | KC988330 | 0.0 | KC988330.1 Oryza sativa AP2 transcription factor mRNA, complete cds. |