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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OB08G25030.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 163aa MW: 17938.8 Da PI: 8.4766 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB08G25030.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 66.3 | 6.2e-21 | 24 | 73 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp+ r r +lg+f+taeeAaka+++a+ +++g
OB08G25030.1 24 KYRGVRQRP-WGKWAAEIRDPR----RaVRKWLGTFDTAEEAAKAYDRAAVEFRG 73
8********.**********82....48***********************9998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 163 aa
Download sequence Send
to blast |
XXXXAAPPAA AAAGQRRRRK KKNKYRGVRQ RPWGKWAAEI RDPRRAVRKW LGTFDTAEEA 60 AKAYDRAAVE FRGPRAKLNF PFPEQLPVHS DGNGNGDGAS AAAKSDTLSP SPCSADADDQ 120 GEQMAWPQGG GETGDQLWEG LQDLMKLDEG ELSWFPQPSD SWN
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK062882 | 1e-112 | AK062882.1 Oryza sativa Japonica Group cDNA clone:001-108-D06, full insert sequence. |
GenBank | AP004399 | 1e-112 | AP004399.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, PAC clone:P0451G12. |
GenBank | AP014964 | 1e-112 | AP014964.1 Oryza sativa Japonica Group DNA, chromosome 8, cultivar: Nipponbare, complete sequence. |
GenBank | CP012616 | 1e-112 | CP012616.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 8 sequence. |