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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OB04G26560.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 453aa MW: 48067.2 Da PI: 7.6146 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB04G26560.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.3 | 4.6e-19 | 205 | 255 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++ + kl+ge
OB04G26560.1 205 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 255
59******9.**********955...5**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 453 aa
Download sequence Send
to blast |
MDAPSGESGG GGGGRRWKGK GVTPIQPRRQ LGTVLEDASV ALLRPLKKIG RSPDRLHRSA 60 SSLSTSSSAP PSPRSSSASD APAGGILSSP PPPSARHIFP FAYEASAAAG GGSPRLHSMW 120 QQSSVSLPTS PQQQQPLQHQ QMISFGASPP CSTTQFVVPE NAQQQQMLLR YWSEALNLSP 180 RGGPGGLPPW LDQQLRAPPP PPQKLYRGVR QRHWGKWVAE IRLPRNRTRL WLGTFDTAED 240 AAMAYDREAF KLRGENARLN FPDRFLGKGR AGGSGRTSVS SAAALSVAAA SCSSSSPSPP 300 ETPGEPNTQQ APQQQEQQRD PAGLSMEKQP QPPAPTSRQE GCSSDNTAAP YSAEMLHAPV 360 ASASGSGGMW VPPDESWFST WGPGSSFWDD YDMDNARGLF LHPRFSSDET SMDHSGTQGT 420 VPATAAGIDM ACDDVPVTSS SSDLPPNGTI SDS
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AL662976 | 0.0 | AL662976.3 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08, complete sequence. |
GenBank | AP014960 | 0.0 | AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence. |
GenBank | CP012612 | 0.0 | CP012612.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 4 sequence. |
GenBank | CR855230 | 0.0 | CR855230.1 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0115K01-H0319F09, complete sequence. |