|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
OB02G33670.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
ERF |
Protein Properties |
Length: 254aa MW: 26839.7 Da PI: 4.6904 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB02G33670.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 36.8 | 9.4e-12 | 85 | 120 | 19 | 56 |
AP2 19 IrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
Irdp+++g r++lg+++ta eAa+a+++a+ +++g+
OB02G33670.1 85 IRDPKKRG--SRVWLGTYDTAIEAARAYDRAAFRMRGA 120
89998876..**************************95 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 254 aa
Download sequence Send
to blast |
MDSSGNIDDF SLQLIHELLL GPDACLPVAQ EHGAAYAEQQ GFQPAAAFLH QQQPTMLAGY 60 MDLGNDQYMG VAAGEAAFRA AGEPIRDPKK RGSRVWLGTY DTAIEAARAY DRAAFRMRGA 120 KAILNFPNEV GSRGADFLAP PPPPPHGKRK RHETAADPDV EVIGDGDSSK SVKTEAYPSP 180 ANSSLASTTT TSTVTSSSTS PSPSSEAAAS GGGGELFVPL TPSSWAWEQW ECFFGSLSPL 240 SPHPQMGFPE VTVS
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP004676 | 1e-115 | AP004676.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1003_B06. |
GenBank | AP005006 | 1e-115 | AP005006.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, PAC clone:P0519E06. |
GenBank | AP014958 | 1e-115 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |