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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Niben101Scf03673g02007.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
WOX |
| Protein Properties |
Length: 247aa MW: 27810.9 Da PI: 5.1634 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Niben101Scf03673g02007.1 | genome | BTI | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 66.6 | 3.4e-21 | 93 | 153 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
r+R+t+t+ ql++Le+ F + n +ps++++++++ +l +++e++V++WFqNrRa+ k+
Niben101Scf03673g02007.1 93 RQRWTPTPVQLQILERIFDQgNGTPSKQKIKDITIELsqhgQISETNVYNWFQNRRARSKR 153
89*****************99**************************************97 PP
|
| 2 | Wus_type_Homeobox | 101.3 | 7e-33 | 93 | 155 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
r+RWtPtp Q++iLe+++++G tP+k++i++it eL+++G+i+++NV++WFQNr+aR+++kq
Niben101Scf03673g02007.1 93 RQRWTPTPVQLQILERIFDQGNGTPSKQKIKDITIELSQHGQISETNVYNWFQNRRARSKRKQ 155
79***********************************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 247 aa
Download sequence Send
to blast |
MEWENQQQQQ PPQTAEDMNG AAAGGGGVMF VKVMTNEQME MLRKQIAVYA VICEQLVDLH 60
KSMASQYDLA GTRLGNLYCD PLITSAGHRI SGRQRWTPTP VQLQILERIF DQGNGTPSKQ 120
KIKDITIELS QHGQISETNV YNWFQNRRAR SKRKQQGGGT TNNVESEVET EVESPNEKKT 180
KPEDLLQSSH IPTSRGEEGS SNPAASFDQL SFYAMSNPRM DQAIEKMEDP GSYHPYLHAE 240
NYDMISQ
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| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 146 | 154 | RRARSKRKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
