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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Neem_6825_f_1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
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Family |
ERF |
Protein Properties |
Length: 243aa MW: 27096.3 Da PI: 6.3155 |
Description |
ERF family protein |
Gene Model |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.8 | 1.3e-18 | 95 | 144 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr ++ +g+++AeIrd + ng r++lg+f++ae Aa a+++a+ +++g
Neem_6825_f_1 95 YRGVRKRP-WGKYAAEIRDSTRNG--VRVWLGTFDSAEAAALAYDQAAFSMRG 144
9*******.**********44465..*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0006952 | Biological Process | defense response |
GO:0009873 | Biological Process | ethylene-activated signaling pathway |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 243 aa
Download sequence Send
to blast |
MESSFLSYPK PEFSPASSFG SSHDSLSWDE LLLSHNSLPF NINDSEEMLL LGVLAEGTTK 60 LESSESISVD GVNKEEEVTS SSKTVEESSK KERSYRGVRK RPWGKYAAEI RDSTRNGVRV 120 WLGTFDSAEA AALAYDQAAF SMRGSLATLN FPIEMVKESL QEMKYRCEDG CSPVVALKRR 180 HSMRKKSSTV NKKSKKKELI DHHHHHQVQV GSQNVVVLED LGADYLEQLL MSSCESSGAT 240 PNW
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that binds to the GCC-box cis-acting elements found in the promoter regions of ethylene-responsive genes (PubMed:23057995). Acts downstream of MYC2 in the jasmonate-mediated response to Botrytis cinerea infection (PubMed:28733419). With MYC2 forms a transcription module that regulates pathogen-responsive genes (PubMed:28733419). {ECO:0000269|PubMed:23057995, ECO:0000269|PubMed:28733419}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by wounding and infection with the fungal pathogen Botrytis cinerea. {ECO:0000269|PubMed:28733419}. |