PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_006464-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bZIP
Protein Properties Length: 374aa    MW: 38928.1 Da    PI: 4.4343
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_006464-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.64.1e-112673052563
                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1  25 kaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                    +ae+eeL+ kv++L++eN++Lk el++l++e+akl+se+
  NNU_006464-RA 267 QAECEELQSKVETLTTENHTLKTELQKLSEECAKLTSEN 305
                    89***********************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.7E-30192IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.3E-13115239No hitNo description
SMARTSM003380.008259307IPR004827Basic-leucine zipper domain
PfamPF001701.9E-8267305IPR004827Basic-leucine zipper domain
CDDcd147029.87E-8267299No hitNo description
Gene3DG3DSA:1.20.5.1708.8E-7267302No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MGSGEDSTPA KPSKSTASTQ ETPTTPSYPD WSTSLQAYYG AGATPPPTFF TSTVASPAPH  60
PYLWGSQHLI PPYGTPLPYP AVYPHGVYAH PNTAAAQGAA VTTTEAEGKA SEGKERVSTK  120
KSKGSSGKES GKAAPGSGND GASQSGESGG EGSSDASDEN DNQQDDSDTK KRSFDQMLAD  180
GASVQNNGSA TVETSFSTRG QPLAKLPVSV PGRSTVTMPA TNLNIGMDLW NATPAGSVPL  240
KARPNASGVS PAPVACEGVM PDHLWIQAEC EELQSKVETL TTENHTLKTE LQKLSEECAK  300
LTSENQSLME ELTRLYGPEA IANIEDNNAS TVLQSTNGDG NDHGEETSRE NDSVSSQKNG  360
NFLNSNGKLD SGSS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019053062.10.0PREDICTED: G-box-binding factor 1
RefseqXP_019053063.10.0PREDICTED: G-box-binding factor 1
TrEMBLA0A1U8Q2L70.0A0A1U8Q2L7_NELNU; G-box-binding factor 1
STRINGXP_010255201.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.13e-34G-box binding factor 1