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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.N02689.1.p |
Common Name | LOC105958897, MIMGU_mgv1a013600mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
MYB |
Protein Properties |
Length: 216aa MW: 24206.8 Da PI: 8.2879 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.N02689.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 56 | 9.2e-18 | 47 | 92 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+W++eEd++l ++v ++G ++W++I +++ gR++k+c++rw +
Migut.N02689.1.p 47 KGPWSAEEDKILTRLVDRYGARNWSLIGKYVK-GRSGKSCRLRWCNQ 92
79*****************************9.***********985 PP
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2 | Myb_DNA-binding | 47.9 | 3.1e-15 | 101 | 143 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
++++ Ed+ ++ a+ ++G++ W+tIar + gRt++ +k++w++
Migut.N02689.1.p 101 PFSKAEDDAIAAAHDRYGNR-WATIARLLH-GRTDNAVKNHWNST 143
79******************.*********.***********986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 216 aa
Download sequence Send
to blast |
MDSFNRCSYA SASSSSSETS SDSSSLSGIK STTTPANNAE VLCERIKGPW SAEEDKILTR 60 LVDRYGARNW SLIGKYVKGR SGKSCRLRWC NQLSPEIEHR PFSKAEDDAI AAAHDRYGNR 120 WATIARLLHG RTDNAVKNHW NSTLKRRCIH LQRQQKRRLD DDDLRDCTES NTASEFSPSP 180 ASCDFYEHDA MTALSLAPPG TERRQENFPV GFWSA*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor (PubMed:23067202, PubMed:23603962). Represses the expression of protein phosphatases 2C in response to abscisic acid (ABA). Confers resistance to abiotic stresses dependent of ABA (PubMed:18162593, PubMed:9678577). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB44 is enhanced by direct interaction between MYB44 and PYL8 (PubMed:24894996). Transcriptional activator of WRKY70 by direct binding to its promoter region, especially at 5'-TAACNG-3' and 5'-CNGTTA-3' symmetric motifs (PubMed:23067202, PubMed:23603962). Activates salicylic acid (SA)- mediated defenses and subsequent resistance to biotrophic pathogen P.syringae pv. tomato DC3000, but represses jasmonic acid (JA)-mediated defenses responses against the necrotrophic pathogen A.brassicicola (PubMed:23067202). {ECO:0000269|PubMed:18162593, ECO:0000269|PubMed:23067202, ECO:0000269|PubMed:23603962, ECO:0000269|PubMed:24894996, ECO:0000269|PubMed:9678577}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By drought, cold, high salinity, cadmium (CdCl(2)), salicylic acid (SA), jasmonate (JA), ethylene, gibberellic acid (GA), and ABA (PubMed:16463103, PubMed:18162593, PubMed:23067202). The induction by JA is COI1-dependent (PubMed:23067202). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:18162593, ECO:0000269|PubMed:23067202}. |
Publications
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- Li C,Chang PP,Ghebremariam KM,Qin L,Liang Y
Overexpression of tomato SpMPK3 gene in Arabidopsis enhances the osmotic tolerance. Biochem. Biophys. Res. Commun., 2014. 443(2): p. 357-62 [PMID:24275141] - Jaradat MR,Feurtado JA,Huang D,Lu Y,Cutler AJ
Multiple roles of the transcription factor AtMYBR1/AtMYB44 in ABA signaling, stress responses, and leaf senescence. BMC Plant Biol., 2013. 13: p. 192 [PMID:24286353] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Li D, et al.
Arabidopsis ABA receptor RCAR1/PYL9 interacts with an R2R3-type MYB transcription factor, AtMYB44. Int J Mol Sci, 2014. 15(5): p. 8473-90 [PMID:24828206] - Xu DB, et al.
A G-protein β subunit, AGB1, negatively regulates the ABA response and drought tolerance by down-regulating AtMPK6-related pathway in Arabidopsis. PLoS ONE, 2015. 10(1): p. e0116385 [PMID:25635681] - Hieno A, et al.
Possible Involvement of MYB44-Mediated Stomatal Regulation in Systemic Resistance Induced by Penicillium simplicissimum GP17-2 in Arabidopsis. Microbes Environ., 2016. 31(2): p. 154-9 [PMID:27301421] - Zhao Q, et al.
AtMYB44 Positively Regulates the Enhanced Elongation of Primary Roots Induced by N-3-Oxo-Hexanoyl-Homoserine Lactone in Arabidopsis thaliana. Mol. Plant Microbe Interact., 2016. 29(10): p. 774-785 [PMID:27604593] - Song L, et al.
A transcription factor hierarchy defines an environmental stress response network. Science, 2017. [PMID:27811239] - Nguyen NH,Cheong JJ
H2A.Z-containing nucleosomes are evicted to activate AtMYB44 transcription in response to salt stress. Biochem. Biophys. Res. Commun., 2018. 499(4): p. 1039-1043 [PMID:29649476] - Nguyen NH,Cheong JJ
AtMYB44 interacts with TOPLESS-RELATED corepressors to suppress protein phosphatase 2C gene transcription. Biochem. Biophys. Res. Commun., 2018. 507(1-4): p. 437-442 [PMID:30448055]
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