PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N00106.3.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 1137aa    MW: 127246 Da    PI: 9.244
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N00106.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.63.8e-104479340
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40
                      rWTteE   ++da +++G++ Wk++a+ +  +R+l+++
  Migut.N00106.3.p 44 RWTTEELTHFYDAYRKYGKN-WKKVANAVR-TRSLEMV 79
                      9*****************99.*********.***9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.64E-103791IPR009057Homeodomain-like
PROSITE profilePS5129310.1244091IPR017884SANT domain
SMARTSM007170.00254189IPR001005SANT/Myb domain
PfamPF002493.2E-74479IPR001005SANT/Myb domain
CDDcd001678.10E-54479No hitNo description
Gene3DG3DSA:1.10.10.601.9E-44475IPR009057Homeodomain-like
PfamPF065842.1E-32646746IPR033471DIRP domain
SMARTSM011351.6E-55646747IPR033471DIRP domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1137 aa     Download sequence    Send to blast
MGPPRKSKSV YRRYTDEVSP CKDGDSAKRS NNRKRKSCNM LGPRWTTEEL THFYDAYRKY  60
GKNWKKVANA VRTRSLEMVD ALYKMNKAYL NLPHGTASLD GLIAMMTDQY SNMAGNDSDQ  120
ENNEGEGSSR KPQKRARGKV QPTTSKASND QFISHSQTAP SSYGCLSLLK KKRSEGSRPC  180
TVGKRTPRFP VSFSYENING EKYVSPTRQG LKLKANANDD EVAHQVAIAL AEASQRGDSP  240
QVYQTPIRRA ESVTLSPFRL GKGKHSLAEM ANTKILTADM DEEDLEGSPE AGTGELCRVK  300
SYRTESLSVV TVREKAKTLE AKKFEVDNNS ENYLYDIKEE CSGTEEGQRF GATRGKLYDA  360
KICRSSRQSQ RKKSKKVFLE KDEAHAFDAL QTLADLSLMM PMENEIDTKL QFKEEDVDHV  420
DESVSPEAPP MILQKQKHKH SGVKMKRYQP ISSLGAASTK TSNTGKASVF NVTSAPEEDQ  480
DPHQSILKTT RKKQKILLSK IKKTEAHPDI HLSKSPGIEA GDGGNNNKLR AKSKKSSQSS  540
TPNVMKSSEN SSSADLQKEA SESVQAAIQV PVVNQENLPT KVRSRRKMQL KKPQVLKDLN  600
CPDKISNDHS SPLTAMPHDT SFSLKEKLSS CLSNPCLRRW CTYEWFYSAI DYPWFAKKEF  660
DEYLCHVGLG NVPRLTRVEW GVIRSSLGKP RRFSEQFLKE EKEKLSQYRD SVRKHYTELR  720
KGVREGLPTD LARPLSVGQR VIAIHPKTRE IHDGSVLTVD HSRCRVQFDR HDLGVEFVKD  780
IDCMPLNPVE NMPALLGRQT RSIDKFLENS NELKINGRAH EAMKLFPGEM VDDPDGISQL  840
SPSANSASLL KQTKVASANA HVYMKIGSAE TASYPPTTFS QSSALAQIQA KEADVLALAE  900
LTRALDKKEA VIRELRHMND DVLENQKDDH SSLKDSEPFE KQYAAVLVQL KETNEQVSSA  960
LCCLRQRNTY QRNVPLAWPR SGIKFAVPGE EFSFDGFALR TYESGSHANE TIDSSRTKSR  1020
QMVDAAIQAM SSLKCREDNT LQKIDEAVDY AHNPKSTSAL ELEAQIPSEL ISRCVATLLM  1080
IQKCTERQFP PSDVARILDS AVTSLKPCSS QNLPVYTEIQ KCMGIIRNQI MALIPT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N00106.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012840977.10.0PREDICTED: protein ALWAYS EARLY 3-like isoform X2
TrEMBLA0A4D8YXC60.0A0A4D8YXC6_SALSN; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21430.20.0DNA binding