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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Migut.M00864.1.p |
| Common Name | LOC105962451, MIMGU_mgv1a009589mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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| Family |
NAC |
| Protein Properties |
Length: 338aa MW: 37168 Da PI: 9.1551 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.M00864.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 173 | 8.8e-54 | 15 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+evd+yk++Pw+Lp+k +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+v+
Migut.M00864.1.p 15 LPPGFRFHPTDEELVVHYLKKKAASAPLPV-SIIAEVDLYKFDPWELPAKSIFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVM 106
79****************************.89***************7666799************************************** PP
NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
++ ++++vg+kk Lvfy g+ pkg kt+W+mheyrl
Migut.M00864.1.p 107 TAgGTQKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 142
*977788***************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009753 | Biological Process | response to jasmonic acid |
| GO:0045995 | Biological Process | regulation of embryonic development |
| GO:0048317 | Biological Process | seed morphogenesis |
| GO:0080060 | Biological Process | integument development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 338 aa
Download sequence Send
to blast |
MESTDSSTGS QKPQLPPGFR FHPTDEELVV HYLKKKAASA PLPVSIIAEV DLYKFDPWEL 60
PAKSIFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPVMTAGG TQKVGVKKAL 120
VFYGGKPPKG IKTNWIMHEY RLTDNKPPNM KPPGCDVTNK KASLRLDDWV LCRIYKKNNA 180
QRPVDQERDE GHDVIMGSFK AGLPAAMAVV GEQQRFLEND HSSFYDGMMS GGDHHLKLQH 240
HQFPLLVSSA AADPNSILAG KRALPGLYWN DDGGGGGGSA SSPPTKRFLT ESCDGSIVSQ 300
LPQTPATLQQ HQAMLGSLGD GVFRQQQYQI SGMNWYA*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-73 | 15 | 180 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-73 | 15 | 180 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-73 | 15 | 180 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-73 | 15 | 180 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 1e-73 | 15 | 180 | 17 | 168 | NAC domain-containing protein 19 |
| 4dul_B | 1e-73 | 15 | 180 | 17 | 168 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor of the NAC family (Probable). Together with NAC018/NARS2, regulates embryogenesis by regulating the development and degeneration of ovule integuments, a process required for intertissue communication between the embryo and the maternal integument (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By Jasmonic acid (JA). {ECO:0000269|PubMed:16805732}. |
