PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F00395.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family TCP
Protein Properties Length: 374aa    MW: 38997.4 Da    PI: 6.6801
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F00395.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP118.49.1e-37992062107
               TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.kaak 92 
                       a+ k++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++ti WLl+ a+pai+e+tgt++ +a ++  +++ +  +   s++ +aa+
  Migut.F00395.1.p  99 APPKRSSKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLERAEPAIIEATGTGTVPAIAVsVNGTLKIPTTPTSAAaAAAA 191
                       57799***********************************************************99999555322222222221111122222 PP

               TCP  93 saakskksqksaasa 107
                       s +++ +++++ as+
  Migut.F00395.1.p 192 SGPETPRKRRKRASN 206
                       222333333333323 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036345.2E-30104190IPR005333Transcription factor, TCP
PROSITE profilePS5136927.342105159IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0031347Biological Processregulation of defense response
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MASILPHHRH RHHPTTTTHH QNLETRNDDD DDDVTALPAD PLLSNDYTIT AVGPAENDGA  60
SPPPSQRCNV VALLKDEPSE GSVQEGGISN PPVTAMVVAP PKRSSKDRHT KVEGRGRRIR  120
MPAACAARIF QLTRELGHKS DGETIRWLLE RAEPAIIEAT GTGTVPAIAV SVNGTLKIPT  180
TPTSAAAAAA ASGPETPRKR RKRASNSEFY DGNGNDASSF APVAPITPQG LVPVFPSGTF  240
FMIPPSAGAA AVTAAGPSSQ PQFWAIPATA TPVYNVSGRP ISNFMSFGVP TGGGNGEAEM  300
GANKSSCSSD KIGATTMAAS SISTVGTTEV AAGTRNSTQM LRDFSLEVYE KRELQFMVGS  360
AAGNHDQTPS PES*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00667PBMTransfer from GSVIVG01027588001Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F00395.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012851979.10.0PREDICTED: transcription factor TCP19
SwissprotQ9LT891e-71TCP19_ARATH; Transcription factor TCP19
TrEMBLA0A022QCR00.0A0A022QCR0_ERYGU; Uncharacterized protein
STRINGMigut.F00395.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24824201
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51910.23e-67TCP family protein