PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00489.1.p
Common NameLOC105966150, MIMGU_mgv1a003601mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ARR-B
Protein Properties Length: 576aa    MW: 64048.6 Da    PI: 6.5737
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00489.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like86.23.2e-27200253155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gL++e+v+SHLQk+Rl
  Migut.E00489.1.p 200 KPRVVWSVELHQQFVGAVNQL-GIDKAVPKRILELMNVPGLSRENVASHLQKFRL 253
                       79*******************.********************************8 PP
2Response_reg76.41.1e-25211291109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl+vdD+ + +++l+q+l+k  y +v+++++++ al+ll+e++  +D++l D+ mp+mdG++ll+     e++lp+i+++a g  +++ + ++
  Migut.E00489.1.p  21 VLVVDDDVICLRVLEQMLRKCMY-QVTSCSQATVALNLLRERKgcFDVVLSDVHMPDMDGFRLLELVGL-EMDLPVIMMSADGRTNLVMRGIR 111
                       89*********************.****************************************87754.558******************** PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        Ga d+l Kp+  eel +
  Migut.E00489.1.p 112 HGACDYLIKPIRDEELKN 129
                       ***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0363923.7E-1541571IPR017053Response regulator B-type, plant
SuperFamilySSF521724.55E-3518141IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23005.6E-4218161No hitNo description
SMARTSM004482.4E-2919131IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011043.27620135IPR001789Signal transduction response regulator, receiver domain
PfamPF000724.3E-2321129IPR001789Signal transduction response regulator, receiver domain
CDDcd001563.63E-2822135No hitNo description
Gene3DG3DSA:1.10.10.601.6E-28197258IPR009057Homeodomain-like
PROSITE profilePS512949.525197256IPR017930Myb domain
SuperFamilySSF466891.29E-18198257IPR009057Homeodomain-like
TIGRFAMsTIGR015572.6E-23200253IPR006447Myb domain, plants
PfamPF002491.2E-5202251IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 576 aa     Download sequence    Send to blast
MACTTGGKSV VPEQFPVGLR VLVVDDDVIC LRVLEQMLRK CMYQVTSCSQ ATVALNLLRE  60
RKGCFDVVLS DVHMPDMDGF RLLELVGLEM DLPVIMMSAD GRTNLVMRGI RHGACDYLIK  120
PIRDEELKNI WQHVLRKRRN EINPSGSIED RDREKRAIDD AECASSANEG EDEVFKTQKK  180
RRECRDEDDT ELEDDPASKK PRVVWSVELH QQFVGAVNQL GIDKAVPKRI LELMNVPGLS  240
RENVASHLQK FRLYLKRLSG VAQQQGGLPT YCGPVEQNLR LASLGRFDIQ ALAASGQLPP  300
QTLAALQAEL FSRPTGNLIL PAMDQRTLLH SSLQESKNSH VDKNVSYCQP LNRCSSNIAN  360
QTSQHLMSNE DVNYSVSSCN LVETNSNTLI TFLQQQHQQR QSITQESIHS INVQPSCLVS  420
PPNFQAGNNQ NCSFSYSAMD YNNPLLQTSN SSGLQVLERE CKPVGTPSES VSSMSSCSRN  480
VQRVPSSPST ISSVLQVPNM NCMQRSTRNS IPSRFAVDEQ EIAAMSSTSQ VRLYVQNNGS  540
KVKQEPNLGF AENVRMGIPV QQHLPPNDLM SVFSD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A4e-22197259264ARR10-B
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00489.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012846161.10.0PREDICTED: two-component response regulator ARR2
RefseqXP_012846162.10.0PREDICTED: two-component response regulator ARR2
RefseqXP_012846163.10.0PREDICTED: two-component response regulator ARR2
SwissprotA2XE311e-143ORR21_ORYSI; Two-component response regulator ORR21
SwissprotQ8H7S71e-143ORR21_ORYSJ; Two-component response regulator ORR21
TrEMBLA0A022QS770.0A0A022QS77_ERYGU; Two-component response regulator
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA77492130
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-114response regulator 2
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]