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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Medtr5g032820.1 |
Common Name | MTR_5g032820 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family |
ERF |
Protein Properties |
Length: 363aa MW: 40096 Da PI: 7.3108 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr5g032820.1 | genome | Mt | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 56.2 | 8.6e-18 | 45 | 94 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +gr++AeIrdp + r +lg+f+taeeAa a++ a+++++g
Medtr5g032820.1 45 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 94
69*******.**********93....35999**********************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009733 | Biological Process | response to auxin |
GO:0009880 | Biological Process | embryonic pattern specification |
GO:0048825 | Biological Process | cotyledon development |
GO:0051726 | Biological Process | regulation of cell cycle |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 363 aa
Download sequence Send
to blast |
MEEALNRLNG TTPPTIQEPD TKKSTNKRTS RDNTASAAGG GGALRYRGVR RRPWGRYAAE 60 IRDPQSKERR WLGTFDTAEE AACAYDCAAR AMRGLKARTN FVYPTSPPPN TTFPSFNFPK 120 HSQAFEKTST NNRHVASCGW SEPHGVDFTH QRNPSTSSLD MLLFREFINS SNSNSSSAHN 180 HFHDNFPYSY NKSSTSSGSG FVAGCCMANS CGGGANSNHQ NTGVDGNNGS KISTDEDFEF 240 FPKESSDSGL LEEIVNRFLP KPKQEIKTEI LPKTTFCDTF VPNAPVFDHT LGKSVTKNEF 300 SGVGFDQNGF NMQQFENFHN GYNGSFQSLP LGNEQIMVNH TENSVIQYQE LLNAFALRMQ 360 NA*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC119414 | 0.0 | AC119414.51 Medicago truncatula clone mth2-23d7, complete sequence. |