PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Medtr4g099070.1 | ||||||||
Common Name | MTR_4g099070 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family | SRS | ||||||||
Protein Properties | Length: 360aa MW: 39685.2 Da PI: 6.0933 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 24.6 | 7.2e-08 | 34 | 77 | 3 | 45 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathv.kstWvp 45 +++ +C++CGn a+ C +e+C+ CC + C hv k+ +p Medtr4g099070.1 34 QNKPKCKQCGNVARSRCPYEQCKSCCSKNQNPCPIHVlKASTIP 77 56679*******************************95555555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 360 aa Download sequence Send to blast |
MATAPSNNST AKVGTLGLTN SPMSSSAPKS QRGQNKPKCK QCGNVARSRC PYEQCKSCCS 60 KNQNPCPIHV LKASTIPDNT PSSGAAPLDR KSFEPPPSIS AGRAASLRQL SNSFAQFNNL 120 HLSLRSKKPL TRKDAAAINE WRFSKLKEYK ERNVDAENEA FDRYMQNVDL LEEVLSVKQS 180 DEDVSSASEA NQTSTENSEV MIPGLKLQLR SNSTRSDGVR IRIKKTVDDG LKKLKCAVDG 240 DSNNEEIDEV SESSNKRKRT EKLSAISDLL DKINKARSEE DLQSCLEVKL QLFNSDEDSA 300 MVQHTDNEMH QNQTAEGDAV PAKELDYSLP KLVGSSEIDQ ETLNIIDKHF SSLEYVEQL* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Medtr4g099070.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013457554.1 | 0.0 | uncharacterized protein LOC25493568 isoform X1 | ||||
TrEMBL | A0A072V0D3 | 0.0 | A0A072V0D3_MEDTR; Electron carrier/iron ion-binding protein, putative | ||||
STRING | XP_004508981.1 | 0.0 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF7690 | 16 | 18 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32730.1 | 3e-90 |
Link Out ? help Back to Top | |
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Phytozome | Medtr4g099070.1 |
Entrez Gene | 25493568 |
Publications ? help Back to Top | |||
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