PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr4g099070.1
Common NameMTR_4g099070
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family SRS
Protein Properties Length: 360aa    MW: 39685.2 Da    PI: 6.0933
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr4g099070.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70224.67.2e-083477345
           DUF702  3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathv.kstWvp 45
                     +++ +C++CGn a+  C +e+C+ CC  +   C  hv k+  +p
  Medtr4g099070.1 34 QNKPKCKQCGNVARSRCPYEQCKSCCSKNQNPCPIHVlKASTIP 77
                     56679*******************************95555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MATAPSNNST AKVGTLGLTN SPMSSSAPKS QRGQNKPKCK QCGNVARSRC PYEQCKSCCS  60
KNQNPCPIHV LKASTIPDNT PSSGAAPLDR KSFEPPPSIS AGRAASLRQL SNSFAQFNNL  120
HLSLRSKKPL TRKDAAAINE WRFSKLKEYK ERNVDAENEA FDRYMQNVDL LEEVLSVKQS  180
DEDVSSASEA NQTSTENSEV MIPGLKLQLR SNSTRSDGVR IRIKKTVDDG LKKLKCAVDG  240
DSNNEEIDEV SESSNKRKRT EKLSAISDLL DKINKARSEE DLQSCLEVKL QLFNSDEDSA  300
MVQHTDNEMH QNQTAEGDAV PAKELDYSLP KLVGSSEIDQ ETLNIIDKHF SSLEYVEQL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr4g099070.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013457554.10.0uncharacterized protein LOC25493568 isoform X1
TrEMBLA0A072V0D30.0A0A072V0D3_MEDTR; Electron carrier/iron ion-binding protein, putative
STRINGXP_004508981.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76901618
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32730.13e-90
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]