PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0162s0003.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family WRKY
Protein Properties Length: 729aa    MW: 77516.4 Da    PI: 6.9292
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0162s0003.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.41.9e-30396455159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          ++Dg++WrKYGqK+ kg+++pr+YYrCt a gCpv+k+v+r+a+d +++++tYeg+Hnh+
  Mapoly0162s0003.1.p 396 MNDGCQWRKYGQKMAKGNPCPRAYYRCTVApGCPVRKQVQRCADDRSILVTTYEGTHNHP 455
                          58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.0E-33381457IPR003657WRKY domain
SuperFamilySSF1182903.53E-28389457IPR003657WRKY domain
PROSITE profilePS5081129.333391457IPR003657WRKY domain
SMARTSM007749.6E-38396456IPR003657WRKY domain
PfamPF031064.1E-27397455IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 729 aa     Download sequence    Send to blast
MGISNGDPPV TASSSGRMDR VQQIDLSIAP AEETYADQET QNMATADYEQ HPASTSTPLP  60
AQNFLQLGPS SGPVSVSNHR ASAESLPSRF RPERGDDSNR LRLATNHCNE RSTVEDGSPP  120
SSPGSKQKST SSESEIRNQL RLARLEMARM GEEKEQMRRM LAALTMDYQT LHEHVVSLLQ  180
QQALNPQSAQ AAAMPRIPVM AQIEDDVTAV NQSRPLMQNI NYGSSAASGN QTAAASKHQS  240
SMRPSGTVSG FGHQNSDARD GIEESRGPGL ELEPRRQQQQ EEEKVFPASR ASRRSALASD  300
NTTTTNKHRN RSTPERSITR NLEAAAGIEM DESAGSEPVT DDSPPREARE REREESSSAP  360
PAVWPPNKRL KTGAMHDPTV RNARVSVRAR SDAPTMNDGC QWRKYGQKMA KGNPCPRAYY  420
RCTVAPGCPV RKQVQRCADD RSILVTTYEG THNHPLPPAA TQMASTTSAA ACMLLSGSSS  480
TAEEDVRVNN NYHQIGSGCV SSSGSAAMLS SSAPFATITL DLTSNPTTQL SLGGASAVPV  540
PFPLGGPLAR PHPWALQNPT SLAPLHTTQY LSAEGARAMQ AAYSNQPEYQ AQGAANGGPQ  600
LLADTVSAAT AAITADPNFT AALAAAITSM ISAQANPRHQ GSSLAGEHST SSLQIQGSSS  660
SDMLVQSIAN SVLRPQPNPH NTSLGNLLNR SALSMSTGSE DHDQASAQQP SIANSQGRKP  720
SHTISQTQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-22383459176WRKY transcription factor 1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00428DAPTransfer from AT4G04450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6W3N30.0A0A2R6W3N3_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.19e-50WRKY family protein