PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.16G101000.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bHLH
Protein Properties Length: 572aa    MW: 65024.6 Da    PI: 9.6795
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.16G101000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.45.4e-13388432554
                          HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                          h + ErrRR++iN++fe Lr+llP+       K +Ka++L+++ +Y+ sL
  Manes.16G101000.1.p 388 HMISERRRREKINESFEALRKLLPPE-----AKKDKASVLTRTRDYLTSL 432
                          8899*********************6.....599*************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.79E-17380453IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.55E-12383436No hitNo description
PROSITE profilePS5088815.917383432IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-16386453IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-10388432IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-13389438IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 572 aa     Download sequence    Send to blast
MDTVFSLLIN EADRAGYLRS LMQSFGCNYI CVWFDMPQPN HHLYFLDGYY HEENNQPGSS  60
SGSLARRLFD EYRQENFLPV NNRVPGMAFV NNQPYRELSE SELQRMASVT VQQRFYQEAR  120
IKTAVFMGCR NGEIEMGWSS GMTQINMENA IRSLFSEDIP HQQSPLRELS QAIDPNRPSS  180
SSSSLRSLSM DSPDSSPFLF NIPITSHFSE IPQETPSLQP IQSTSSAIQR VLQSLQQVKN  240
TTNPLRQTMQ LQPAQSSTIP LQPAVPSLQP MPSPTRSHQA ALQAFALTRN VHLPSQESED  300
AAMTRAILAV LTSPSSSTSS ITPNPPSNYR ENQRTSAFKN YLTPTRPMSQ SLRKQSMLKR  360
AITYYRSLNI ARREHMVASR PTSTQLHHMI SERRRREKIN ESFEALRKLL PPEAKKDKAS  420
VLTRTRDYLT SLKAQIDELS KRNQQLEAQI KQLPEKEVAQ DAFQSSSNER VEVQVTNISE  480
STSEEQRIID LRVVLRGEYP IQDMVIRILE FLNQVNNVNA MSLEANTRTT ESRSLNLVAL  540
RLKIEGQGWT LKKKCRSKAN QFILKQTDPI P*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1391396ERRRRE
2392397RRRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.16G101000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021596921.10.0putative transcription factor bHLH041 isoform X1
TrEMBLA0A2C9UC650.0A0A2C9UC65_MANES; Uncharacterized protein
STRINGcassava4.1_026569m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41503354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.12e-51bHLH family protein