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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Manes.13G023700.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
|
| Family |
ERF |
| Protein Properties |
Length: 404aa MW: 43710 Da PI: 6.9267 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.13G023700.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 57.2 | 4.2e-18 | 57 | 106 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +gr++AeIrdp + r +lg+f+taeeAa a+++a+++++g
Manes.13G023700.1.p 57 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDRAARAMRG 106
59*******.**********93....35999**********************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009733 | Biological Process | response to auxin |
| GO:0009880 | Biological Process | embryonic pattern specification |
| GO:0048825 | Biological Process | cotyledon development |
| GO:0051726 | Biological Process | regulation of cell cycle |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 404 aa
Download sequence Send
to blast |
MEEALRRLSG MTHVQESIPD NHKKSTNGAP AVASAAASTA NKRSLKESGG GSGGTMRYRG 60
VRRRPWGRYA AEIRDPQSKE RRWLGTFDTA EEAACAYDRA ARAMRGLKAR TNFVYPTSDP 120
HSSTDHFVPP VGLSSKQAQA SIRDIPSRQC NSNSSNWPSF GNPDVGDFSG SAPQRSNSAS 180
FNMLLLRDFL DPSSGSSLYN HPQALYDQFP HINGSCSSLS NTFPSGKNPS NDSNVSDTFA 240
GSSLSALPMN DDNQSYNSSG GSGKPNSQVD YLEFFPREPS DSGLLQEIIQ GFLPKPASEK 300
IHSSSSSLNC TGESIVAPGP EMSTSYPSLD EFRRSIESEL LVKNENLGVY LGHYHGGSAQ 360
FKSSHGINSH VVPYGHVGLQ EKLHHQMGAD SILQDIFQHP DFM*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1gcc_A | 4e-19 | 58 | 113 | 3 | 59 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
| 5wx9_A | 8e-19 | 45 | 113 | 1 | 71 | Ethylene-responsive transcription factor ERF096 |
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