 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Manes.12G008700.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
|
| Family |
WRKY |
| Protein Properties |
Length: 191aa MW: 21920.6 Da PI: 9.7892 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.12G008700.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 105.3 | 3.1e-33 | 111 | 169 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+++v++tYeg H h+
Manes.12G008700.1.p 111 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHKGCNVKKQVQRLTRDEEIVVTTYEGMHSHP 169
59********************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0000122 | Biological Process | negative regulation of transcription from RNA polymerase II promoter |
| GO:0010055 | Biological Process | atrichoblast differentiation |
| GO:0032107 | Biological Process | regulation of response to nutrient levels |
| GO:0043620 | Biological Process | regulation of DNA-templated transcription in response to stress |
| GO:0048527 | Biological Process | lateral root development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 191 aa
Download sequence Send
to blast |
MENFTPFLPL SSSVATPMSL NMGSSQGFTD YFQATNENAF LGLIQEMEDH RPVVGGLNGE 60
NSNRSSQNKS VSGSENEDEL LGKKKKKGSS SEKKMRKHRY AFQTRSRVDI LDDGYRWRKY 120
GQKAVKNNKF PRSYYRCTHK GCNVKKQVQR LTRDEEIVVT TYEGMHSHPI EKSMDNFEHI 180
LTQMQIYNSF *
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 82 | 93 | KKKKKGSSSEKK |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KT827611 | 0.0 | KT827611.1 Manihot esculenta WRKY transcription factor 36 mRNA, complete cds. |
