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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MLOC_14305.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family |
LFY |
Protein Properties |
Length: 323aa MW: 34905.6 Da PI: 9.079 |
Description |
LFY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_14305.1 | genome | IBSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FLO_LFY | 396 | 4.6e-121 | 1 | 323 | 1 | 330 |
FLO_LFY 1 mdpea..fsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslse 95
mdp++ ++a+ f+wd + ++pa + + +++p a a++ rele+l+ +yGvr +tva+i+elGft+ tL+ m+++eldd++++l+
MLOC_14305.1 1 MDPNDvfLAAHPFRWDLGS---PAPAAVPPPPPPPPPP---PALPPANAPRELEDLVVGYGVRASTVARISELGFTATTLLVMTERELDDMTAALAG 91
788776447779****532...2333333333222233...345566779*********************************************** PP
FLO_LFY 96 ifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglgeaelvaaeekkseeekkkaskkk 192
+fr+dll+Ger+G++aa+raer rl++ r++ ++ +t+ a+sqe+ls+e++ a+sgg g+ +a ++a+ kk+++ + +++kk
MLOC_14305.1 92 LFRWDLLIGERFGLRAALRAERGRLMSPG---CRHHGYQSG-STVDGAASQEVLSNERD-----GAASGGIGEDDAMRMMASGKKQKNGSAGRKAKK 179
**************************955...555533333.3455689*******977.....456666655554444444433333333333445 PP
FLO_LFY 193 qkrkkkkelkse....ededeee....eededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkv 281
++rkk ++l+ e +e+ +e+++++ +g g erqrehPf+vtepgevar+kknGLDYLf+Lye+Cr Llqvq++ak +G+k+Ptkv
MLOC_14305.1 180 ARRKKVNDLRLGmqgdE--HEDGggglSESTESSAGGGVGGERQREHPFVVTEPGEVARAKKNGLDYLFHLYEECRVLLLQVQSMAKLHGQKAPTKV 274
66666665554433321..2222112144555556778889******************************************************** PP
FLO_LFY 282 tnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkerg 330
tnqvfrya k+gasyinkPkmrhYvhCYalhcLde+as+alrra+k+rg
MLOC_14305.1 275 TNQVFRYASKVGASYINKPKMRHYVHCYALHCLDEDASDALRRAYKARG 323
***********************************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010077 | Biological Process | maintenance of inflorescence meristem identity |
GO:0010582 | Biological Process | floral meristem determinacy |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0031490 | Molecular Function | chromatin DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MDPNDVFLAA HPFRWDLGSP APAAVPPPPP PPPPPPALPP ANAPRELEDL VVGYGVRAST 60 VARISELGFT ATTLLVMTER ELDDMTAALA GLFRWDLLIG ERFGLRAALR AERGRLMSPG 120 CRHHGYQSGS TVDGAASQEV LSNERDGAAS GGIGEDDAMR MMASGKKQKN GSAGRKAKKA 180 RRKKVNDLRL GMQGDEHEDG GGGLSESTES SAGGGVGGER QREHPFVVTE PGEVARAKKN 240 GLDYLFHLYE ECRVLLLQVQ SMAKLHGQKA PTKVTNQVFR YASKVGASYI NKPKMRHYVH 300 CYALHCLDED ASDALRRAYK ARG
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor (By similarity). Together with APO1, involved in the temporal regulation of meristem size and identity during both vegetative and reproductive developments through interaction with APO1 (PubMed:21910771). Promotes flowering (PubMed:21910771). {ECO:0000250|UniProtKB:Q00958, ECO:0000269|PubMed:21910771}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB231888 | 0.0 | AB231888.1 Triticum aestivum WFLa mRNA for FLORICAULA/LEAFY-like protein, complete cds. |
GenBank | AB231890 | 0.0 | AB231890.1 Triticum aestivum WFLd mRNA for FLORICAULA/LFAFY-like protein, complete cds. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G61850.1 | 1e-59 | floral meristem identity control protein LEAFY (LFY) |