PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MELO3C013287P1

Organism

Cucumis melo

Taxonomic ID

3656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis

Family

NAC

Protein Properties

Length: 283aa MW: 32526.1 Da PI: 6.3753

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MELO3C013287P1	genome	MELONOMICS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	145	4e-45	8	134	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPt+eel+++yLk+ v+gk+l++ + i +++y+++PwdLp ++ +e+ewyfF++rd+k + r+nr+tk+gyWkatg+d++++s MELO3C013287P1 8 PGFRFHPTEEELLNFYLKHVVSGKRLQF-DPIGILNLYQHDPWDLPGLARIGEREWYFFVPRDRKLGGSGRPNRTTKNGYWKATGSDRKIVSLsd 101 9************************9.89***********8778899*********************************99766 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++l+gl+ktLvfy gra +g+ktdW+m+eyr+ MELO3C013287P1 102 PKRLIGLRKTLVFYLGRATRGTKTDWIMNEYRF 134 7788*************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	51.861	6	152	IPR003441	NAC domain
SuperFamily	SSF101941	2.75E-54	7	152	IPR003441	NAC domain
Pfam	PF02365	2.0E-25	8	133	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009965	Biological Process	leaf morphogenesis
GO:0010200	Biological Process	response to chitin
GO:0045792	Biological Process	negative regulation of cell size
GO:0048281	Biological Process	inflorescence morphogenesis
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence Send to blast
MAHETDLPGF RFHPTEEELL NFYLKHVVSG KRLQFDPIGI LNLYQHDPWD LPGLARIGER 60 EWYFFVPRDR KLGGSGRPNR TTKNGYWKAT GSDRKIVSLS DPKRLIGLRK TLVFYLGRAT 120 RGTKTDWIMN EYRFPDNSPL PKDMVLCKIY RKATSLKVLE QRAAKEEEDA KPFQASYSPP 180 ASPFETISFC SQQEAMVSSV TPTHEVLDKE VEVATMVDEI QEDKAVEPKI SCTSLQIPSE 240 LEKLTELQVP KLDMDWSQDL FWTQFNSPWL QTLTPYASML NF*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	6e-45	8	152	17	168	Stress-induced transcription factor NAC1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	LN681798	0.0	LN681798.1 Cucumis melo genomic scaffold, anchoredscaffold00019.
GenBank	LN713255	0.0	LN713255.1 Cucumis melo genomic chromosome, chr_1.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008447882.1	0.0	PREDICTED: protein FEZ-like
Swissprot	Q10S65	2e-95	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A1S3BIF7	0.0	A0A1S3BIF7_CUCME; protein FEZ-like
STRING	XP_008447882.1	0.0	(Cucumis melo)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF6214	32	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	1e-109	NAC domain containing protein 36

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]