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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MDP0000463846 |
Common Name | MYB5 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family |
MYB |
Protein Properties |
Length: 320aa MW: 34631.1 Da PI: 8.6448 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MDP0000463846 | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 60.1 | 4.8e-19 | 12 | 57 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+W++eEde l ++vk +G+++W++I++ ++ gR++k+c++rw +
MDP0000463846 12 KGPWSPEEDEALQNLVKNYGPRNWSLISKSIP-GRSGKSCRLRWCNQ 57
79******************************.***********985 PP
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2 | Myb_DNA-binding | 54.6 | 2.5e-17 | 66 | 108 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
++++eEd+ +++a++++G++ W+tIar ++ gRt++ +k++w++
MDP0000463846 66 PFSPEEDDTIIRAHARFGNK-WATIARLLN-GRTDNAIKNHWNST 108
89******************.*********.***********986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 320 aa
Download sequence Send
to blast |
MASTKKVVDR IKGPWSPEED EALQNLVKNY GPRNWSLISK SIPGRSGKSC RLRWCNQLSP 60 EVEHRPFSPE EDDTIIRAHA RFGNKWATIA RLLNGRTDNA IKNHWNSTLK RKSSSMSEDL 120 SSDVQAHPPH KRSASVGAVP VTGLYFNPGS PSGSDLSDSS LPGGVSPSSQ VFTPFARPLP 180 PPIALPPMEA VTSAMAVDPP TSLSLSLPGS ESCDGSSHMA SGFGTNSIVG PAQIVQQAPE 240 VTAPPRAVGL PPAPRQSNQN SETGHDQQFF SSEFLDMMQE MIRKEVRNYM TGIEQKGLCM 300 HTEAIRNAVV KRIGISRIE*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB627312 | 0.0 | AB627312.1 Malus x domestica mRNA, microsatellite: MEST188, clone: SAM01_20_H07. |