 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MDP0000190783 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
|
| Family |
HSF |
| Protein Properties |
Length: 265aa MW: 30084.9 Da PI: 8.2898 |
| Description |
HSF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MDP0000190783 | genome | GDR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HSF_DNA-bind | 101.4 | 8e-32 | 158 | 240 | 2 | 93 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkel 93
Fl+k++++++d+e++++isws+ +sf+v+d ef++++Lpk+Fkh+nf+SF+RQLn+YgF+kv++++ weF+++ F++g+ ++
MDP0000190783 158 FLNKTFQMVDDPETDSIISWSDARQSFIVWDLYEFSRTLLPKHFKHNNFSSFIRQLNTYGFRKVDQDR---------WEFANERFQEGRGRS 240
9****************************************************************999.........********9987532 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MTIRDTCEES FVLENNDEQN SGGRVTLSGL LNFTDGHWSC CGDERHGTAA LRTHGRPRQP 60
RYMRSPHLPA AGKELLEARC PPTLRSSRLE VVLAMQARIN LGVGGGSRDQ LAELDSSCDD 120
QTVKMSCCSI IYSSLSSSSS MDLPKPMEGL REAGPPPFLN KTFQMVDDPE TDSIISWSDA 180
RQSFIVWDLY EFSRTLLPKH FKHNNFSSFI RQLNTYGFRK VDQDRWEFAN ERFQEGRGRS 240
KMEDRLRKKR NKILQTKSGS GLPMN
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5d5u_B | 2e-22 | 139 | 249 | 10 | 129 | Heat shock factor protein 1 |
| 5d5v_B | 2e-22 | 139 | 249 | 10 | 129 | Heat shock factor protein 1 |
| 5d5v_D | 2e-22 | 139 | 249 | 10 | 129 | Heat shock factor protein 1 |
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 236 | 248 | RGRSKMEDRLRKK |
| 2 | 243 | 249 | DRLRKKR |
