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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Lsa002875 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
|
| Family |
MYB |
| Protein Properties |
Length: 240aa MW: 26645.8 Da PI: 6.5317 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PUT-187a-Lactuca_sativa-10327 | PU_ref | plantGDB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 59 | 1.1e-18 | 12 | 57 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+W+ eEdell ++v+++G ++W++I++ ++ gR++k+c++rw +
Lsa002875 12 KGPWSSEEDELLGNLVERHGARNWTLISKSIP-GRSGKSCRLRWCNQ 57
79******************************.***********985 PP
|
| 2 | Myb_DNA-binding | 57.6 | 2.9e-18 | 66 | 108 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
++T+eEd+ +v+a+k++G++ W+tIar ++ gRt++ +k++w++
Lsa002875 66 SFTEEEDKVIVEAHKRFGNK-WATIARLLN-GRTDNAVKNHWNST 108
69******************.*********.***********986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 240 aa
Download sequence Send
to blast |
MESSRSDLDR IKGPWSSEED ELLGNLVERH GARNWTLISK SIPGRSGKSC RLRWCNQLSP 60
EVEHRSFTEE EDKVIVEAHK RFGNKWATIA RLLNGRTDNA VKNHWNSTLK RKSSTVDGGE 120
ERSARVLRRP ESGGADVTVA MSMSMSGSPS GSDICDSGNN IPFLSIGKNN TTSYGLIGLQ 180
PPPSTALTLS PPGTSSYGYE VRDQATPFGA EILSVMQEMI RKEVRKYMEE EEEERKVDAV
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}. |
