PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus

Family

bZIP

Protein Properties

Length: 147aa MW: 16455.5 Da PI: 6.8074

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Lj1g3v4897980.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44.5	3.3e-14	30	78	5	53
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 ++ +r+++NRe+ArrsR RK++ ++eL+ v++L +eN+++ l+ + Lj1g3v4897980.1 30 RKRKRMISNRESARRSRMRKQKHLDELAAQVAQLRSENQQMLTSLNLTT 78 6789************************************998887665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.6E-11	20	76	No hit	No description
SMART	SM00338	9.1E-18	26	90	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.657	28	91	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.13E-12	30	81	No hit	No description
Pfam	PF00170	2.3E-11	30	75	IPR004827	Basic-leucine zipper domain
CDD	cd14702	2.92E-20	31	82	No hit	No description
PROSITE pattern	PS00036	0	33	48	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 147 aa Download sequence Send to blast
MASSSGTSSG SSMIQNSGSE EELQALMDQR KRKRMISNRE SARRSRMRKQ KHLDELAAQV 60 AQLRSENQQM LTSLNLTTQR FMIIDAENSV LSAQMGELSH RLESLNEIID FVNATNGVFA 120 ANSFVDPIPS AYYLNHPIMA SADILQY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	29	50	RKRKRMISNRESARRSRMRKQK
2	42	49	RRSRMRKQ

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Lja.5491	7e-83	floral bud\| flower\| pod\| root

Expression -- Description ? help Back to Top
Source	Description
Uniprot	TISSUE SPECIFICITY: Expressed in the micropylar endosperm and radicle tip in early germinating seeds. {ECO:0000269\|PubMed:23461773}.

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269\|PubMed:23461773}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Lj1g3v4897980.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP004942	0.0	AP004942.1 Lotus japonicus genomic DNA, chromosome 1, clone: LjT43P05, TM0113, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027355431.1	1e-66	bZIP transcription factor 11-like
Swissprot	C0Z2L5	2e-42	BZP44_ARATH; bZIP transcription factor 44
TrEMBL	A0A445HKP6	4e-64	A0A445HKP6_GLYSO; BZIP transcription factor 44
TrEMBL	Q0GPF8	4e-64	Q0GPF8_SOYBN; BZIP transcription factor
STRING	GLYMA12G04440.1	6e-65	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF613	34	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34590.1	1e-43	G-box binding factor 6

Publications ? help Back to Top
Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] Pedrotti L, et al. Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness. Plant Cell, 2018. 30(2): p. 495-509 [PMID:29348240]