PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV21873.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bZIP
Protein Properties Length: 408aa    MW: 44030.2 Da    PI: 9.9362
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV21873.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1681.5e-21274336163
                 XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 e+elkrerrkq+NRe+ArrsR+RK+ae eeL+ kv +L++eN++Lk+el +l k+++klk e+
  KZV21873.1 274 ERELKRERRKQSNRESARRSRLRKQAEAEELAIKVRALTSENTTLKSELTKLMKNSEKLKLEN 336
                 89**********************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.7E-25492IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165965.3E-9114211No hitNo description
Gene3DG3DSA:1.20.5.1704.2E-17267333No hitNo description
SMARTSM003383.0E-19274338IPR004827Basic-leucine zipper domain
PfamPF001707.1E-20274336IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.725276339IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-10277333No hitNo description
CDDcd147021.37E-18279327No hitNo description
PROSITE patternPS000360281296IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MEDTEDGKPS NTVTIAAPAA DQNGIHVYPD WAAMQAYYGP RLAVPPYINS LATSHTPPPP  60
YMWAPPQSMI PPYGAPYAAF YAHGGVYAHP GVHIGGTALS MDMPAKTFGN SDGNFVKKLK  120
GFDGLAMSIG NGNSNNADNA ARHGVMKSEE TEGSSDGSKA SSNKTTWDVP SDKKRSRQGS  180
PNSGKLFLSS NATHPSKNRG SDKDQKQSSI VPGAAVGQGS EKVKDVIVSA KVESESKVNM  240
STALELKNPS DSNVSGPRTP TKPLIPSETW LQDERELKRE RRKQSNRESA RRSRLRKQAE  300
AEELAIKVRA LTSENTTLKS ELTKLMKNSE KLKLENATIM EKLKDAQKTS DFKLKPVSTV  360
NLLARVNKNS NSTDRNNENG DSLDNTSPGA KLHLLLDTSP RTDAVAAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1290296RRSRLRK
2290297RRSRLRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV21873.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011093357.11e-161common plant regulatory factor 1 isoform X3
TrEMBLA0A2Z7AJI50.0A0A2Z7AJI5_9LAMI; Transcriptional activator TAF-1
STRINGSolyc01g095460.2.11e-135(Solanum lycopersicum)
STRINGMigut.B01828.1.p1e-135(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31132447
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-91G-box binding factor 3