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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Itr_sc000967.1_g00007.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
WOX |
| Protein Properties |
Length: 231aa MW: 26245.5 Da PI: 8.8896 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000967.1_g00007.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 64.4 | 1.6e-20 | 4 | 65 | 1 | 57 |
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
r++R+++t+eq+ +Lee+++k r p++++++ L+++l +++ ++V++WFqN++a+++k
Itr_sc000967.1_g00007.1 4 RQSRWSPTPEQIMILEEMYQKgLRSPNTSQIQMLSAHLslygKIEGKNVYYWFQNHKARDRK 65
689*****************99**************************************97 PP
|
| 2 | Wus_type_Homeobox | 109.7 | 1.6e-35 | 5 | 66 | 3 | 64 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
++RW+PtpeQi+iLee+y++Glr+Pn+++iq ++a+L+ yGkie+kNV+yWFQN+kaR+r+k
Itr_sc000967.1_g00007.1 5 QSRWSPTPEQIMILEEMYQKGLRSPNTSQIQMLSAHLSLYGKIEGKNVYYWFQNHKARDRKK 66
79**********************************************************99 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 231 aa
Download sequence Send
to blast |
MSSRQSRWSP TPEQIMILEE MYQKGLRSPN TSQIQMLSAH LSLYGKIEGK NVYYWFQNHK 60
ARDRKKLKKR LNKQVHHYHQ SFSGTTVDEL SPLHLHRPSF AQPHHHSHSS PQSQSYPSSS 120
AGYLLQATVV GEEEEEEDAF QLLPTPVNFH PRKMDLTRPQ HSDQTPATTT VETSSSSSCI 180
TRTTMDGRDC IFTMATGPTL PCCTTHHTPH TPLKTLQLFP TSSTKVKEGH L
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 62 | 70 | DRKKLKKRL |
| 2 | 63 | 69 | RKKLKKR |
