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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Itr_sc000588.1_g00012.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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| Family |
WOX |
| Protein Properties |
Length: 212aa MW: 24167.6 Da PI: 10.1211 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000588.1_g00012.1 | genome | Kazusa | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 57.4 | 2.5e-18 | 9 | 70 | 1 | 57 |
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
r +R+++t+eql +L+el+++ r+p+a + + ++++l ++++++V++WFqN++a++++
Itr_sc000588.1_g00012.1 9 RPRRWSPTPEQLMVLQELYRRgLRNPNAFQVRTITSHLalygKIETKNVFYWFQNHKARDRQ 70
568*****************99*************************************996 PP
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| 2 | Wus_type_Homeobox | 103.4 | 1.5e-33 | 11 | 71 | 4 | 64 |
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
RW+PtpeQ+++L+ely++Glr+Pn+ +++ it++L+ yGkie kNVfyWFQN+kaR+rq+
Itr_sc000588.1_g00012.1 11 RRWSPTPEQLMVLQELYRRGLRNPNAFQVRTITSHLALYGKIETKNVFYWFQNHKARDRQR 71
6***********************************************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 212 aa
Download sequence Send
to blast |
MVGGEVTCRP RRWSPTPEQL MVLQELYRRG LRNPNAFQVR TITSHLALYG KIETKNVFYW 60
FQNHKARDRQ RLKKTLRQHL RYRPVFARQQ PQQPAGTQVQ NGCHQFLDGR SSSLDFCSAF 120
CHLSPRISTF LHQGGGGEEI LNMGVPTSCD NAGNSMTTTR MFDRDWMMLM ETGSSSVPRW 180
VDRTPITLQL FPLQATDIKG ESSTISSPVS SC
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