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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Han005788 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
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Family | NAC | ||||||||
Protein Properties | Length: 261aa MW: 29789.4 Da PI: 8.9582 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 144.6 | 5.4e-45 | 9 | 135 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelv 100 pGfrFhPt+eel+ +yLkk v gk + + evi ++ y ++Pw Lp++ k +e+ewyfF++r+kk +g r+nr+tk+g+Wkatg+d++++s ++++ Han005788 9 PGFRFHPTEEELLEFYLKKMVLGKYTCF-EVIGFLNTYLYDPWILPEMSKIGEREWYFFVPRNKKLGNGGRPNRTTKNGFWKATGSDRKIFSLsdTKKHL 107 9**********************99666.99***************8888999*************************************998667888* PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 glkktLvfy+grap g+ktdWvm eyrl Han005788 108 GLKKTLVFYQGRAPGGQKTDWVMSEYRL 135 **************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 51.609 | 7 | 153 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 7.98E-54 | 8 | 153 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.1E-25 | 9 | 135 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence Send to blast |
MNPLELELPG FRFHPTEEEL LEFYLKKMVL GKYTCFEVIG FLNTYLYDPW ILPEMSKIGE 60 REWYFFVPRN KKLGNGGRPN RTTKNGFWKA TGSDRKIFSL SDTKKHLGLK KTLVFYQGRA 120 PGGQKTDWVM SEYRLPDSCP LSKDIVLCKI YRKATSIKVL EQRAAMEEAQ PPSPPTSTQS 180 QHLDFLALSP MRLGHVASCT KDSQASKEPT LKLPTGSKEL SELQLPKTDM GWCQDSQSRS 240 PWLQDLLFTP SPCANVLNFL D |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-44 | 5 | 153 | 12 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022011680.1 | 0.0 | NAC domain-containing protein 35-like | ||||
Swissprot | Q10S65 | 7e-82 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A1Y0ATP2 | 0.0 | A0A1Y0ATP2_HELAN; NAC domain containing protein | ||||
STRING | cassava4.1_013334m | 1e-103 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 4e-97 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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