PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han001056
Organism
Helianthus annuus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family bZIP
Protein Properties Length: 348aa    MW: 36553 Da    PI: 9.7998
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Han#S32085443PU_unrefUnigeneView CDS
PUT-169a-Helianthus_annuus-26513PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_165.21.2e-20216278163
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                e+elkre+rkq+NRe+ArrsR+RK+ae eeL ++v++L++eN +Lk+e+++l+ ++ +lk ++
  Han001056 216 ERELKREKRKQSNRESARRSRLRKQAEAEELGTRVEALTSENLKLKSEINQLTVNATNLKLQN 278
                89********************************************************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.0E-142173IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165963.9E-997208No hitNo description
Gene3DG3DSA:1.20.5.1709.6E-16211276No hitNo description
SMARTSM003381.4E-18216280IPR004827Basic-leucine zipper domain
PfamPF001701.1E-18216278IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.61218281IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.75E-10219275No hitNo description
CDDcd147024.01E-19221268No hitNo description
PROSITE patternPS000360223238IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MGNCEEAKDC KPEETSSPPA AYYGPRMAVP PYFSSPVASG HAPPPYMWGP MPHMMPPYAA  60
IYPHGGVYAH PGVTVAGNPN PTLVPIDSCA KSSGNPDRGL IKKLKGIDEL TMSIGNNNGI  120
SNSRDTEGSS EGSDGNTSCK NGHKRIRGGS STSSEGGKTE RSDANGVSKK VTGVKILGKE  180
VGAVISGDSG TELELKKSPA SANMAMVPNS LVLQNERELK REKRKQSNRE SARRSRLRKQ  240
AEAEELGTRV EALTSENLKL KSEINQLTVN ATNLKLQNAK LLEKLKKATE GPRADKKGSS  300
LSTANLLSRV DNRSGSVVGE ATSSGSGAPL YQLLDASPRA DGVAAGAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1232238RRSRLRK
2232239RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022021468.10.0common plant regulatory factor 1-like isoform X3
SwissprotQ990891e-95CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A251RTD40.0A0A251RTD4_HELAN; Putative basic-leucine zipper domain, G-box binding protein, multifunctional mosaic region
STRINGXP_002511955.11e-101(Ricinus communis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.17e-68G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]